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The map label for this gene is 194334226

Identifier: 194334226

GI number: 194334226

Start: 1542457

End: 1544016

Strand: Reverse

Name: 194334226

Synonym: Paes_1418

Alternate gene names: NA

Gene position: 1544016-1542457 (Counterclockwise)

Preceding gene: 194334227

Following gene: 194334225

Centisome position: 61.44

GC content: 45.96

Gene sequence:

>1560_bases
ATGATCCCTGAAAATTGTTTCAATTTGATTGACGAGCCATGGATACCCGTCATTGACAAAGGACGAATAAGCTTGCGACA
GGTATTCAGCGAACCTGATAATCGTGCTCTTGGTGGAAATCCACTGCAAAAACTGGCGTTGACAAAGCTGCTGCTTGCAA
TTGGTCAGGCGGCCTGTACCCCTGAAAACGATGAGATTCATGCATCAATGGAGAGTTCGGAGCTTGCCCAAAAGTGCCTT
GAATACCTTGACATATGGCACGACAGATTCTGGCTTTATGGCAAAAAACCCTTTCTGCAAATACCAACCATAAACGGCCT
TATTGAACGACGAAAACGAAAGGATCTTCATGCTGCCACCAGTCAGGCTGGAAAACGAAATGCTGAAGCGAGAGCACAAC
CAAAATCTATCGGAATGGGTTTTTATCCTGATGTGCCAGCAGAAAACAACACCATACTCACTCAGTATCAGGTGCCTAAG
ATCTTGGCAGATGCCGACAAGGCCTTATTCCTTGTCTCTCTCATGAACTTTGCACTGGGAGGAAAGCGTACCGAAAAAAA
CCTCGATACCTTAACGGATGGATATGTTGGTAAAACAGTGTCGGCAAAAGCTGCACCAAGTATTGGAAATTATAACGGGT
ATCTCCACTCCATTCTTGTCGGTAAAACCATCATTGATACTCTCCTCCTGAATCTTCTTTCAAAAGAGCGGATAAAAGAA
AATGCATACTGGACGACAGGATTAGGAATCGCTCCATGGGAAGAAATGCCGAAAGGAGAAGCCTGTCCGACAGCCATGAA
GCTGAAAAGTTCTTATATGGCAACACTAATCTCCCTTTCTCGTTTTGTTTTATTGAAGGGTGACGGCATCTATTACGTAG
AGGGTCTTCAATATCCGAGCCATAAAGACGGATGGCGAGAGCCAAGCATGGCCGTAAATGCAGGAGGCGCAACGCCAAAA
ATCAAGTGGATTGATCCAAACAAGCGACCATGGAGGGAACTAGCTTCCTTGCTCGCATTCATGAGTGCGGGTGGTAGACA
GGGTTATGATTGCCAGTTCATCCGGTATGGTCTTGTTCGCTTCCGTAGCAGGTACAAGCAGGTTGGTGTCTGGTCAGGAG
GACTTAAGGTAACTACTAACGCAGGCGACCAGTCGGTCAAACAGGATGATGATTTTGTTGAATCACTTATTTTTCTTGAT
TGCGCCATTCTTGGTGAGCCATGGTACCATCAATTGCAGGTGGAGATGGATGCACTCGACCAATTGTCCAAGACTGTCTG
GGCTGCAATAAACGACTTTTTTAAGACTCAGAATATGGCTGGTTCCAGTTTGGCAGGGCAGGCAACAACAATGTTCTGGG
AACTCTGCGAACGCCGCTTTCAGGATTTGGTTGATGCCTGTGCCCCCCCTTACGACACCTTAAGAGTAAGAAAGGTATTT
GCGCAGTCAGCCATAAAAGCCTACGACGCTTTTTGCCCCAAAGAAAGTGCACGGCAGATTGACGCATGGGCAAAAAACAG
ACCTAATCTTATCAACTATCTCAATTCGGAGAACAAATAA

Upstream 100 bases:

>100_bases
CCCTGAGTGGTCAGAATGCATCGTCTTCATACAGGATCAGTTACAGTTCAAGGCAGGGATATCGGGCCATAAAAATATAA
ACAGGTAAAACAACTGAGAT

Downstream 100 bases:

>100_bases
CCTATGAACAACGAACCTGAAACAAAAATCAGCAGGTCTCAGGCATTTGTGCAGTTCATTATTGCCTTGATCAAGCAGAA
TAAGGGCGCCGCTGCAGTAC

Product: CRISPR-associated Cse1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Crispr-Associated Cse1 Family Protein

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MIPENCFNLIDEPWIPVIDKGRISLRQVFSEPDNRALGGNPLQKLALTKLLLAIGQAACTPENDEIHASMESSELAQKCL
EYLDIWHDRFWLYGKKPFLQIPTINGLIERRKRKDLHAATSQAGKRNAEARAQPKSIGMGFYPDVPAENNTILTQYQVPK
ILADADKALFLVSLMNFALGGKRTEKNLDTLTDGYVGKTVSAKAAPSIGNYNGYLHSILVGKTIIDTLLLNLLSKERIKE
NAYWTTGLGIAPWEEMPKGEACPTAMKLKSSYMATLISLSRFVLLKGDGIYYVEGLQYPSHKDGWREPSMAVNAGGATPK
IKWIDPNKRPWRELASLLAFMSAGGRQGYDCQFIRYGLVRFRSRYKQVGVWSGGLKVTTNAGDQSVKQDDDFVESLIFLD
CAILGEPWYHQLQVEMDALDQLSKTVWAAINDFFKTQNMAGSSLAGQATTMFWELCERRFQDLVDACAPPYDTLRVRKVF
AQSAIKAYDAFCPKESARQIDAWAKNRPNLINYLNSENK

Sequences:

>Translated_519_residues
MIPENCFNLIDEPWIPVIDKGRISLRQVFSEPDNRALGGNPLQKLALTKLLLAIGQAACTPENDEIHASMESSELAQKCL
EYLDIWHDRFWLYGKKPFLQIPTINGLIERRKRKDLHAATSQAGKRNAEARAQPKSIGMGFYPDVPAENNTILTQYQVPK
ILADADKALFLVSLMNFALGGKRTEKNLDTLTDGYVGKTVSAKAAPSIGNYNGYLHSILVGKTIIDTLLLNLLSKERIKE
NAYWTTGLGIAPWEEMPKGEACPTAMKLKSSYMATLISLSRFVLLKGDGIYYVEGLQYPSHKDGWREPSMAVNAGGATPK
IKWIDPNKRPWRELASLLAFMSAGGRQGYDCQFIRYGLVRFRSRYKQVGVWSGGLKVTTNAGDQSVKQDDDFVESLIFLD
CAILGEPWYHQLQVEMDALDQLSKTVWAAINDFFKTQNMAGSSLAGQATTMFWELCERRFQDLVDACAPPYDTLRVRKVF
AQSAIKAYDAFCPKESARQIDAWAKNRPNLINYLNSENK
>Mature_519_residues
MIPENCFNLIDEPWIPVIDKGRISLRQVFSEPDNRALGGNPLQKLALTKLLLAIGQAACTPENDEIHASMESSELAQKCL
EYLDIWHDRFWLYGKKPFLQIPTINGLIERRKRKDLHAATSQAGKRNAEARAQPKSIGMGFYPDVPAENNTILTQYQVPK
ILADADKALFLVSLMNFALGGKRTEKNLDTLTDGYVGKTVSAKAAPSIGNYNGYLHSILVGKTIIDTLLLNLLSKERIKE
NAYWTTGLGIAPWEEMPKGEACPTAMKLKSSYMATLISLSRFVLLKGDGIYYVEGLQYPSHKDGWREPSMAVNAGGATPK
IKWIDPNKRPWRELASLLAFMSAGGRQGYDCQFIRYGLVRFRSRYKQVGVWSGGLKVTTNAGDQSVKQDDDFVESLIFLD
CAILGEPWYHQLQVEMDALDQLSKTVWAAINDFFKTQNMAGSSLAGQATTMFWELCERRFQDLVDACAPPYDTLRVRKVF
AQSAIKAYDAFCPKESARQIDAWAKNRPNLINYLNSENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58216; Mature: 58216

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPENCFNLIDEPWIPVIDKGRISLRQVFSEPDNRALGGNPLQKLALTKLLLAIGQAACT
CCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PENDEIHASMESSELAQKCLEYLDIWHDRFWLYGKKPFLQIPTINGLIERRKRKDLHAAT
CCCCCEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHHHHHHHH
SQAGKRNAEARAQPKSIGMGFYPDVPAENNTILTQYQVPKILADADKALFLVSLMNFALG
HHHHCCCCHHHCCHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHC
GKRTEKNLDTLTDGYVGKTVSAKAAPSIGNYNGYLHSILVGKTIIDTLLLNLLSKERIKE
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAYWTTGLGIAPWEEMPKGEACPTAMKLKSSYMATLISLSRFVLLKGDGIYYVEGLQYPS
CCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCC
HKDGWREPSMAVNAGGATPKIKWIDPNKRPWRELASLLAFMSAGGRQGYDCQFIRYGLVR
CCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FRSRYKQVGVWSGGLKVTTNAGDQSVKQDDDFVESLIFLDCAILGEPWYHQLQVEMDALD
HHHHHHHCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHH
QLSKTVWAAINDFFKTQNMAGSSLAGQATTMFWELCERRFQDLVDACAPPYDTLRVRKVF
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AQSAIKAYDAFCPKESARQIDAWAKNRPNLINYLNSENK
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MIPENCFNLIDEPWIPVIDKGRISLRQVFSEPDNRALGGNPLQKLALTKLLLAIGQAACT
CCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PENDEIHASMESSELAQKCLEYLDIWHDRFWLYGKKPFLQIPTINGLIERRKRKDLHAAT
CCCCCEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHHHHHHHH
SQAGKRNAEARAQPKSIGMGFYPDVPAENNTILTQYQVPKILADADKALFLVSLMNFALG
HHHHCCCCHHHCCHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHC
GKRTEKNLDTLTDGYVGKTVSAKAAPSIGNYNGYLHSILVGKTIIDTLLLNLLSKERIKE
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAYWTTGLGIAPWEEMPKGEACPTAMKLKSSYMATLISLSRFVLLKGDGIYYVEGLQYPS
CCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCC
HKDGWREPSMAVNAGGATPKIKWIDPNKRPWRELASLLAFMSAGGRQGYDCQFIRYGLVR
CCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FRSRYKQVGVWSGGLKVTTNAGDQSVKQDDDFVESLIFLDCAILGEPWYHQLQVEMDALD
HHHHHHHCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHH
QLSKTVWAAINDFFKTQNMAGSSLAGQATTMFWELCERRFQDLVDACAPPYDTLRVRKVF
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AQSAIKAYDAFCPKESARQIDAWAKNRPNLINYLNSENK
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA