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The map label for this gene is 194334225

Identifier: 194334225

GI number: 194334225

Start: 1541920

End: 1542453

Strand: Reverse

Name: 194334225

Synonym: Paes_1417

Alternate gene names: NA

Gene position: 1542453-1541920 (Counterclockwise)

Preceding gene: 194334226

Following gene: 194334224

Centisome position: 61.38

GC content: 45.88

Gene sequence:

>534_bases
ATGAACAACGAACCTGAAACAAAAATCAGCAGGTCTCAGGCATTTGTGCAGTTCATTATTGCCTTGATCAAGCAGAATAA
GGGCGCCGCTGCAGTACTACGCCGAGCAGATAACCCTGCAACCGAATACCAAAGCTGGGAGTATTTGGCTGCCTTCAATA
TTGACCTGGAAAAGCCCTGGGAACGCTTGCCGTTTGCTATAGTCGCGGCAGCGATTGCAAAAGGAAAAATCGAAAGCAAC
GGATCGATTGGTATAGGCAATGCCATAGCGCGTAGTTATGAAGATGGAAATCAAAGTGATCAGGCAAAAGCTAAACTGCG
ACGCCTGCTTGCTTGCGGCTCCGTCGAGGAAGTATGCAGAATTCTTCGTCCTTTGTTCAGTTTGTTCGAATCCAGAGGAG
TTACCCTTATTAACTATGCAGGGTTGCTTGAGCAATTGCTGAAATTTCATTGGGACTGCCAGAGAATCAAAACGCAATGG
GCACAGGAATTCTACAGGCAAAATCAGAAAATAGAAACAAAGGAGGCTGTATGA

Upstream 100 bases:

>100_bases
CGACGCTTTTTGCCCCAAAGAAAGTGCACGGCAGATTGACGCATGGGCAAAAAACAGACCTAATCTTATCAACTATCTCA
ATTCGGAGAACAAATAACCT

Downstream 100 bases:

>100_bases
TTGCAAGTATACTTCGCCTTGGCCCGAAAGAGATAAAGGCTCTGCGTATTACCGATGACTATTCGCTGCACAGGGTTGTC
TACAGTCTCTTTGAAGACCG

Product: CRISPR-associated Cse2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse2 Family Protein; Crispr-Associated Cse2 Family Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNNEPETKISRSQAFVQFIIALIKQNKGAAAVLRRADNPATEYQSWEYLAAFNIDLEKPWERLPFAIVAAAIAKGKIESN
GSIGIGNAIARSYEDGNQSDQAKAKLRRLLACGSVEEVCRILRPLFSLFESRGVTLINYAGLLEQLLKFHWDCQRIKTQW
AQEFYRQNQKIETKEAV

Sequences:

>Translated_177_residues
MNNEPETKISRSQAFVQFIIALIKQNKGAAAVLRRADNPATEYQSWEYLAAFNIDLEKPWERLPFAIVAAAIAKGKIESN
GSIGIGNAIARSYEDGNQSDQAKAKLRRLLACGSVEEVCRILRPLFSLFESRGVTLINYAGLLEQLLKFHWDCQRIKTQW
AQEFYRQNQKIETKEAV
>Mature_177_residues
MNNEPETKISRSQAFVQFIIALIKQNKGAAAVLRRADNPATEYQSWEYLAAFNIDLEKPWERLPFAIVAAAIAKGKIESN
GSIGIGNAIARSYEDGNQSDQAKAKLRRLLACGSVEEVCRILRPLFSLFESRGVTLINYAGLLEQLLKFHWDCQRIKTQW
AQEFYRQNQKIETKEAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20078; Mature: 20078

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEPETKISRSQAFVQFIIALIKQNKGAAAVLRRADNPATEYQSWEYLAAFNIDLEKPW
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHEECCCCCCHH
ERLPFAIVAAAIAKGKIESNGSIGIGNAIARSYEDGNQSDQAKAKLRRLLACGSVEEVCR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH
ILRPLFSLFESRGVTLINYAGLLEQLLKFHWDCQRIKTQWAQEFYRQNQKIETKEAV
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MNNEPETKISRSQAFVQFIIALIKQNKGAAAVLRRADNPATEYQSWEYLAAFNIDLEKPW
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHEECCCCCCHH
ERLPFAIVAAAIAKGKIESNGSIGIGNAIARSYEDGNQSDQAKAKLRRLLACGSVEEVCR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH
ILRPLFSLFESRGVTLINYAGLLEQLLKFHWDCQRIKTQWAQEFYRQNQKIETKEAV
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA