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The map label for this gene is visC [C]

Identifier: 194334215

GI number: 194334215

Start: 1530718

End: 1531914

Strand: Reverse

Name: visC [C]

Synonym: Paes_1407

Alternate gene names: 194334215

Gene position: 1531914-1530718 (Counterclockwise)

Preceding gene: 194334219

Following gene: 194334214

Centisome position: 60.96

GC content: 53.05

Gene sequence:

>1197_bases
ATGCAATGCTATGATGCTGTTATTTCGGGAGCAGGACCTGCGGGGTGTTCTGCGGCACTGTTTCTTGCTGCCAAAGGGCA
TCGAGTCCTGTTGCTCGACAAGGCGCGTTTTCCCAGGGACAAGACCTGTGGGGACGGTGTGACGGCCGCTTCGTCGAGCC
TGCTGGAAGAGATTGGCGTGATGGAGGTTGTCAAACAACGCCTTGGCGACCGGCCTGAAATTCAGGGCGTTACGCTTTCG
TCCCCTTCTGGCACGGTTGTTCGGGGCCGTTTGCTGAAGGTGAAGCGGTTTTCGGGTGGTGATTATGTGATCCCGAGGGA
GATGCTTGACGACTGCCTGGTTTCGTGTGTTCGTGAGCATCCTGACGTGACATTTCTTGACAATGCTGCTGTTACCAGCA
TCACGATGGATGGTCAAAGAGCCCGATCTCTTTCCACCAGCCGCGGCGACTTTTCCGGTCGTGTTATCATTGGCGCTGAC
GGTTCGTATTCTCCTCTTGCTTCTCAATTGCATTTGAACAATACCAGCAAAGAGCACCAGGGCTTTGCTATTCGGGCTTA
CTTTTCGAAGGTCGAGGGGTTGACGGATACTATAGAGATTCACTACGACCGATCCATTGGTTCCGGCTATGGCTGGATAT
TTCCTCTGGGTGATAAGCGGGCTAATGTCGGAGTTGGGATAACCTCCCGAAACATGGAGCGTCGCAGGCTCAAGCGCATG
TTTGAGCAGTTTATCGAGACAAATCCGTTTGCAGTCGCGAAATTGCGGCATGCGCGTATGGAGTCGGGGACGCTGAAGGC
ATATCCTCTGCCGTTGGGTTCATTTCGGGGAAAGCGAAGCCGTGGCAATGTGCTGCTTGCAGGCGATGCGGCCAGCTTTG
TCGATCCTTTGACCGGGGAAGGTATTTTTTATGCGCTGCAAAGCGGCCGGTATGCCGCTGAAGCAGCGTCAAGAGCCATC
GGGGAAGATGAGACGCGGGCGTCCGCTTATTACGAGAAGCTTTGGCGGAAAGAGTTTTTGTTCCATGATTTTAGAGTGGG
ATATCTTCTGCAGTCGCTCTTGCAGCATGAGTTTATCATGGAATCACTGCTGAAGTTTGCCTCCGGAAAGCAACGTCGCG
CCGATCTGCTCGCTGCCGTGATTGGCCATAACAGGAGAAAAATCGAGTTGCTGAAAATGCTGATACCGTTTTTTTAA

Upstream 100 bases:

>100_bases
ACGATTGTATGGATGAACTTTTTGGTGTCCCGTTGGAGAGGGGAGTTGCAACGTTTTGGTAATCATGCGATCATGATGCG
GAATTGACAAAAGGAGGGGT

Downstream 100 bases:

>100_bases
ACAGCATTTTGAGGTATTGAGGAGCGCTCACGACGCTCTGTGACTTCAGGCATGATTTAATAGTATTCTTAACGATTTTT
CAGATCATGGAAGCACAATC

Product: geranylgeranyl reductase

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MQCYDAVISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGVMEVVKQRLGDRPEIQGVTLS
SPSGTVVRGRLLKVKRFSGGDYVIPREMLDDCLVSCVREHPDVTFLDNAAVTSITMDGQRARSLSTSRGDFSGRVIIGAD
GSYSPLASQLHLNNTSKEHQGFAIRAYFSKVEGLTDTIEIHYDRSIGSGYGWIFPLGDKRANVGVGITSRNMERRRLKRM
FEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGNVLLAGDAASFVDPLTGEGIFYALQSGRYAAEAASRAI
GEDETRASAYYEKLWRKEFLFHDFRVGYLLQSLLQHEFIMESLLKFASGKQRRADLLAAVIGHNRRKIELLKMLIPFF

Sequences:

>Translated_398_residues
MQCYDAVISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGVMEVVKQRLGDRPEIQGVTLS
SPSGTVVRGRLLKVKRFSGGDYVIPREMLDDCLVSCVREHPDVTFLDNAAVTSITMDGQRARSLSTSRGDFSGRVIIGAD
GSYSPLASQLHLNNTSKEHQGFAIRAYFSKVEGLTDTIEIHYDRSIGSGYGWIFPLGDKRANVGVGITSRNMERRRLKRM
FEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGNVLLAGDAASFVDPLTGEGIFYALQSGRYAAEAASRAI
GEDETRASAYYEKLWRKEFLFHDFRVGYLLQSLLQHEFIMESLLKFASGKQRRADLLAAVIGHNRRKIELLKMLIPFF
>Mature_398_residues
MQCYDAVISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGVMEVVKQRLGDRPEIQGVTLS
SPSGTVVRGRLLKVKRFSGGDYVIPREMLDDCLVSCVREHPDVTFLDNAAVTSITMDGQRARSLSTSRGDFSGRVIIGAD
GSYSPLASQLHLNNTSKEHQGFAIRAYFSKVEGLTDTIEIHYDRSIGSGYGWIFPLGDKRANVGVGITSRNMERRRLKRM
FEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGNVLLAGDAASFVDPLTGEGIFYALQSGRYAAEAASRAI
GEDETRASAYYEKLWRKEFLFHDFRVGYLLQSLLQHEFIMESLLKFASGKQRRADLLAAVIGHNRRKIELLKMLIPFF

Specific function: Not Yet Known. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43955; Mature: 43955

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCYDAVISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGV
CCHHHHHHCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
MEVVKQRLGDRPEIQGVTLSSPSGTVVRGRLLKVKRFSGGDYVIPREMLDDCLVSCVREH
HHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHC
PDVTFLDNAAVTSITMDGQRARSLSTSRGDFSGRVIIGADGSYSPLASQLHLNNTSKEHQ
CCEEEECCCEEEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHC
GFAIRAYFSKVEGLTDTIEIHYDRSIGSGYGWIFPLGDKRANVGVGITSRNMERRRLKRM
CEEEEEHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHH
FEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGNVLLAGDAASFVDPLTGE
HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCC
GIFYALQSGRYAAEAASRAIGEDETRASAYYEKLWRKEFLFHDFRVGYLLQSLLQHEFIM
CEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLLKFASGKQRRADLLAAVIGHNRRKIELLKMLIPFF
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQCYDAVISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGV
CCHHHHHHCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
MEVVKQRLGDRPEIQGVTLSSPSGTVVRGRLLKVKRFSGGDYVIPREMLDDCLVSCVREH
HHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHC
PDVTFLDNAAVTSITMDGQRARSLSTSRGDFSGRVIIGADGSYSPLASQLHLNNTSKEHQ
CCEEEECCCEEEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHC
GFAIRAYFSKVEGLTDTIEIHYDRSIGSGYGWIFPLGDKRANVGVGITSRNMERRRLKRM
CEEEEEHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHH
FEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGNVLLAGDAASFVDPLTGE
HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCC
GIFYALQSGRYAAEAASRAIGEDETRASAYYEKLWRKEFLFHDFRVGYLLQSLLQHEFIM
CEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLLKFASGKQRRADLLAAVIGHNRRKIELLKMLIPFF
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]