| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334211
Identifier: 194334211
GI number: 194334211
Start: 1527432
End: 1528952
Strand: Reverse
Name: 194334211
Synonym: Paes_1403
Alternate gene names: NA
Gene position: 1528952-1527432 (Counterclockwise)
Preceding gene: 194334212
Following gene: 194334210
Centisome position: 60.84
GC content: 47.67
Gene sequence:
>1521_bases ATGCGTTCTGAAAACATTCATATGTTTATTTTTTTCATTGTCATTTCTCACTCCGGACGGTTGCTCAGGGACCTGGTTTT TTTTCTTCTGACGGTAGCTTGTCTTGTTTCGATCCAGCCTGAAGCGGTTGTTGCAGAACCGCTGACACAAGAGGCTTTTG TCGCTCTTTTAGAGAAACGTCACCCGGTCTTTGAAAAAGAACGACTGTCGAGCGCTATCGAAGAGGCCACACAACAGGGG TATCTCGGAGATACTGACTGGAACCTTTCTTCTTCTTTGACATGGTCGCGTGAAGAGGCGACGATAACCGCTTTCAGCCC TGATCTCTCCACATCTCTTGGTCTGCAAACCGGTTTGAGCAAACAGTTCTGGGAGACCGGGGGGCGTCTTTCAGCTATCT ATGCTATCAACCGTTCTTCCAGCTCTTTTGAAGAGATCCCGCTTTTTTCGTATCCGGATACTTTTTATGAGAACAGTGTC GAGCTGCAATATGCTCAACCGCTCTTGAGGAATCGAGGCGGCAAACTGAGTCGTTTGCAGTACGATCTTAAGGGATATGA TGTCGATGTTTCCGGTATTCAGGCTGTCGAGAATATTGAGGAGTTTCTTGCAGCGTCAATCTCCAAATATCTTGACTGGG TCTATCTTGAAGAGCAGAAAAAAATAATGTCGCGCAGACTTGATCTGAGCCGCCGGGAGTTCGAGAGGACGCAGAGCAAG TTTAATGCGTATCTGGTGGATTCAGCCGACGTGATGCGCTCGAAAGATGCTCTGAATACCTGGAGACAGAATCTTGGCCT GGTGGAGTTACAGTTGACTGCCCTGAAAGAAGAACTTTCGGTTCTTGTTCAGAGCGATGTTGTGTTGCGTGCAGAGCCTG ATTTCAATTTATATACTGAGCATCGTTTCGAATCCCTTGCCTCTGCCCGGACAAAGCTTGAGCGTGGTTCACGTCTTTTG AAAATACTCGAGTTACGAAAGCAACAGCTTGATGTCAATGCCATCGGGGTCAGGGAAACCGGCAAGCCGGATCTCTCTCT TATTGCCGCAGTAACCTTCAAGAGCGCAGAGGGGAGCGCTGGAGAGTCGTTTGACTTTGACAAAAAAGACGCGGCGTTAG GTCTTCAGCTTTCTGTTCCTCTTGAGAATACCACAGCTAAGGCGGAGTATCAGAGAACCCGTCTTCAGACTCTTCAGCTT GGCAAGGAACGTCAGGATGTAATGCTTTCTCTCAACGCCTCTCTTTCGTCTTTGCATACACAGTTAAGGAAACTCTCGGA GGTTCTTGAACTGAATCGAGAGCAGATTGAGTCTGCACGGCTGAGAACCATTGAAGAGACCAAAATCTATGAGCAGGGGA GAGGAGATCTTACGTTTGTCATCATGAGCAGGGATAATGAGGAAAGCGCCAAGCTTACCTATGCAGAAAACGCACTGAAC TATCAGAAACTCTGGGTGCAATATCAGGCGCTGATGGATGAGTTGTATGGGGAAGGAATAGTTCTGGGTTCTGAGTTCTG A
Upstream 100 bases:
>100_bases GCTCTGCTGGCAGGAGCAGCAAGAAACATGTGAAGAGGTGCATGAACTTTTGCATGGATCACTTTGTTTTCAGTTGTAAC AGTTTTTATGAGATATGTAA
Downstream 100 bases:
>100_bases GTGCAGGAGCCGGGCGGCGGGCGCGCCTGTTGGCGCAGGAGTTTCAGGTGGCGTTTTACGATCTACCAGTCATCGCCCGG AAAGGAGCATTTTCTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRSENIHMFIFFIVISHSGRLLRDLVFFLLTVACLVSIQPEAVVAEPLTQEAFVALLEKRHPVFEKERLSSAIEEATQQG YLGDTDWNLSSSLTWSREEATITAFSPDLSTSLGLQTGLSKQFWETGGRLSAIYAINRSSSSFEEIPLFSYPDTFYENSV ELQYAQPLLRNRGGKLSRLQYDLKGYDVDVSGIQAVENIEEFLAASISKYLDWVYLEEQKKIMSRRLDLSRREFERTQSK FNAYLVDSADVMRSKDALNTWRQNLGLVELQLTALKEELSVLVQSDVVLRAEPDFNLYTEHRFESLASARTKLERGSRLL KILELRKQQLDVNAIGVRETGKPDLSLIAAVTFKSAEGSAGESFDFDKKDAALGLQLSVPLENTTAKAEYQRTRLQTLQL GKERQDVMLSLNASLSSLHTQLRKLSEVLELNREQIESARLRTIEETKIYEQGRGDLTFVIMSRDNEESAKLTYAENALN YQKLWVQYQALMDELYGEGIVLGSEF
Sequences:
>Translated_506_residues MRSENIHMFIFFIVISHSGRLLRDLVFFLLTVACLVSIQPEAVVAEPLTQEAFVALLEKRHPVFEKERLSSAIEEATQQG YLGDTDWNLSSSLTWSREEATITAFSPDLSTSLGLQTGLSKQFWETGGRLSAIYAINRSSSSFEEIPLFSYPDTFYENSV ELQYAQPLLRNRGGKLSRLQYDLKGYDVDVSGIQAVENIEEFLAASISKYLDWVYLEEQKKIMSRRLDLSRREFERTQSK FNAYLVDSADVMRSKDALNTWRQNLGLVELQLTALKEELSVLVQSDVVLRAEPDFNLYTEHRFESLASARTKLERGSRLL KILELRKQQLDVNAIGVRETGKPDLSLIAAVTFKSAEGSAGESFDFDKKDAALGLQLSVPLENTTAKAEYQRTRLQTLQL GKERQDVMLSLNASLSSLHTQLRKLSEVLELNREQIESARLRTIEETKIYEQGRGDLTFVIMSRDNEESAKLTYAENALN YQKLWVQYQALMDELYGEGIVLGSEF >Mature_506_residues MRSENIHMFIFFIVISHSGRLLRDLVFFLLTVACLVSIQPEAVVAEPLTQEAFVALLEKRHPVFEKERLSSAIEEATQQG YLGDTDWNLSSSLTWSREEATITAFSPDLSTSLGLQTGLSKQFWETGGRLSAIYAINRSSSSFEEIPLFSYPDTFYENSV ELQYAQPLLRNRGGKLSRLQYDLKGYDVDVSGIQAVENIEEFLAASISKYLDWVYLEEQKKIMSRRLDLSRREFERTQSK FNAYLVDSADVMRSKDALNTWRQNLGLVELQLTALKEELSVLVQSDVVLRAEPDFNLYTEHRFESLASARTKLERGSRLL KILELRKQQLDVNAIGVRETGKPDLSLIAAVTFKSAEGSAGESFDFDKKDAALGLQLSVPLENTTAKAEYQRTRLQTLQL GKERQDVMLSLNASLSSLHTQLRKLSEVLELNREQIESARLRTIEETKIYEQGRGDLTFVIMSRDNEESAKLTYAENALN YQKLWVQYQALMDELYGEGIVLGSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57579; Mature: 57579
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSENIHMFIFFIVISHSGRLLRDLVFFLLTVACLVSIQPEAVVAEPLTQEAFVALLEKR CCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHC HPVFEKERLSSAIEEATQQGYLGDTDWNLSSSLTWSREEATITAFSPDLSTSLGLQTGLS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHCCC KQFWETGGRLSAIYAINRSSSSFEEIPLFSYPDTFYENSVELQYAQPLLRNRGGKLSRLQ HHHHHCCCCEEEEEEEECCCCCHHHCCCCCCCCHHHCCCCEEHHHHHHHHCCCCCEEEEE YDLKGYDVDVSGIQAVENIEEFLAASISKYLDWVYLEEQKKIMSRRLDLSRREFERTQSK EECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH FNAYLVDSADVMRSKDALNTWRQNLGLVELQLTALKEELSVLVQSDVVLRAEPDFNLYTE CCEEEECCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCHHH HRFESLASARTKLERGSRLLKILELRKQQLDVNAIGVRETGKPDLSLIAAVTFKSAEGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEECCCCCC GESFDFDKKDAALGLQLSVPLENTTAKAEYQRTRLQTLQLGKERQDVMLSLNASLSSLHT CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH QLRKLSEVLELNREQIESARLRTIEETKIYEQGRGDLTFVIMSRDNEESAKLTYAENALN HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHCH YQKLWVQYQALMDELYGEGIVLGSEF HHHHHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure MRSENIHMFIFFIVISHSGRLLRDLVFFLLTVACLVSIQPEAVVAEPLTQEAFVALLEKR CCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHC HPVFEKERLSSAIEEATQQGYLGDTDWNLSSSLTWSREEATITAFSPDLSTSLGLQTGLS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHCCC KQFWETGGRLSAIYAINRSSSSFEEIPLFSYPDTFYENSVELQYAQPLLRNRGGKLSRLQ HHHHHCCCCEEEEEEEECCCCCHHHCCCCCCCCHHHCCCCEEHHHHHHHHCCCCCEEEEE YDLKGYDVDVSGIQAVENIEEFLAASISKYLDWVYLEEQKKIMSRRLDLSRREFERTQSK EECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH FNAYLVDSADVMRSKDALNTWRQNLGLVELQLTALKEELSVLVQSDVVLRAEPDFNLYTE CCEEEECCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCHHH HRFESLASARTKLERGSRLLKILELRKQQLDVNAIGVRETGKPDLSLIAAVTFKSAEGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEECCCCCC GESFDFDKKDAALGLQLSVPLENTTAKAEYQRTRLQTLQLGKERQDVMLSLNASLSSLHT CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH QLRKLSEVLELNREQIESARLRTIEETKIYEQGRGDLTFVIMSRDNEESAKLTYAENALN HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHCH YQKLWVQYQALMDELYGEGIVLGSEF HHHHHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA