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The map label for this gene is ylbH [H]

Identifier: 194334180

GI number: 194334180

Start: 1494250

End: 1494798

Strand: Reverse

Name: ylbH [H]

Synonym: Paes_1372

Alternate gene names: 194334180

Gene position: 1494798-1494250 (Counterclockwise)

Preceding gene: 194334181

Following gene: 194334179

Centisome position: 59.48

GC content: 48.45

Gene sequence:

>549_bases
GTGCAGATTCAAACCGGCATATATAAAGGCCAGAAGCTTCTTCGCGCATCGAATCGCGCAATCCGTCCCTGCAGCAGCAG
GGTGAAAAAGTCGCTGTTTGATACCCTCGCTTTTCGTCTGGATTTTGAGGGTATTGCTGTCCTTGATCTTTTTGCCGGTT
TCGGTTCGCTGGGTTTTGAGGCGCTGAGCCTTGGGGCACAGCGTGTCTGTTTCGTTGACCAGAATGTTGATTCGCTTCGT
TCTCTCAAGGCGACGACTGAGAAACTGGGCGTTGGTTCCTGTGTCAGAATTGTCAAACAGGATGTTCTTCGCTTTATCAG
GTCTGAGAAAGGCGCCTATTCACTGGTTTTTTGTGATCCGCCTTATAGCTGGCCTGATTATCCGGCTCTGGTTTCATCTG
TTTTTGAACACGGTCTTGTTGCTTCGCATGGCATGATGCTGATGGAGCACAGTGCCGAGCATGATTTGACGGGGATTGAG
CAGTATGCTTTTCATAAGGATTATGGAATGACAAGGGTAACTTTTTTTATGCTGGAGGAACAGCCATGA

Upstream 100 bases:

>100_bases
CAACTGGCACGGCAAACCGCCTTCTGCGGATCATTGCGAGAAAGCTTTGGCGATTCTTGGTGAAACCTCTTTCGGCGATT
ATTGATCGCCGCGTTATAAG

Downstream 100 bases:

>100_bases
CACAGATCGCCATTTATCCCGGGACGTTTGACCCATTTACTAACGGTCATCTTGACGTCTTCGAGCGGGCATCGAACATT
TTTGATTCAGTCGTTGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQIQTGIYKGQKLLRASNRAIRPCSSRVKKSLFDTLAFRLDFEGIAVLDLFAGFGSLGFEALSLGAQRVCFVDQNVDSLR
SLKATTEKLGVGSCVRIVKQDVLRFIRSEKGAYSLVFCDPPYSWPDYPALVSSVFEHGLVASHGMMLMEHSAEHDLTGIE
QYAFHKDYGMTRVTFFMLEEQP

Sequences:

>Translated_182_residues
MQIQTGIYKGQKLLRASNRAIRPCSSRVKKSLFDTLAFRLDFEGIAVLDLFAGFGSLGFEALSLGAQRVCFVDQNVDSLR
SLKATTEKLGVGSCVRIVKQDVLRFIRSEKGAYSLVFCDPPYSWPDYPALVSSVFEHGLVASHGMMLMEHSAEHDLTGIE
QYAFHKDYGMTRVTFFMLEEQP
>Mature_182_residues
MQIQTGIYKGQKLLRASNRAIRPCSSRVKKSLFDTLAFRLDFEGIAVLDLFAGFGSLGFEALSLGAQRVCFVDQNVDSLR
SLKATTEKLGVGSCVRIVKQDVLRFIRSEKGAYSLVFCDPPYSWPDYPALVSSVFEHGLVASHGMMLMEHSAEHDLTGIE
QYAFHKDYGMTRVTFFMLEEQP

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=183, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20399; Mature: 20399

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQTGIYKGQKLLRASNRAIRPCSSRVKKSLFDTLAFRLDFEGIAVLDLFAGFGSLGFE
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALSLGAQRVCFVDQNVDSLRSLKATTEKLGVGSCVRIVKQDVLRFIRSEKGAYSLVFCDP
HHHHCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PYSWPDYPALVSSVFEHGLVASHGMMLMEHSAEHDLTGIEQYAFHKDYGMTRVTFFMLEE
CCCCCCHHHHHHHHHHCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEC
QP
CC
>Mature Secondary Structure
MQIQTGIYKGQKLLRASNRAIRPCSSRVKKSLFDTLAFRLDFEGIAVLDLFAGFGSLGFE
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALSLGAQRVCFVDQNVDSLRSLKATTEKLGVGSCVRIVKQDVLRFIRSEKGAYSLVFCDP
HHHHCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PYSWPDYPALVSSVFEHGLVASHGMMLMEHSAEHDLTGIEQYAFHKDYGMTRVTFFMLEE
CCCCCCHHHHHHHHHHCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEC
QP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]