| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is yghO [H]
Identifier: 194334159
GI number: 194334159
Start: 1469463
End: 1470596
Strand: Reverse
Name: yghO [H]
Synonym: Paes_1350
Alternate gene names: 194334159
Gene position: 1470596-1469463 (Counterclockwise)
Preceding gene: 194334160
Following gene: 194334149
Centisome position: 58.52
GC content: 48.85
Gene sequence:
>1134_bases ATGTCCATTGAAATCAGGCGGGTAGAAGGTAAACGGGATCGGAAACAGTTTATCCGTTTTGCATGGGATATCTATCGGAA AGATGAGAGGCTCAATCGCTACTGGGTGCCTCCTGTGATTTCCGATTATATGAAGACACTGGACACGGCACGTTATCCTC TGTATGATCATGCCGATCTGGCGCTCTTTACCGCCTGGAAAAACGGTCAGATGGCAGGCACTATCGCTGCGATTGAAAAC CGTCGCCACAATGAGGTGCATCAGGACAAGGTCGGTTTCTGGGGCTTTTTTGAATGTATCGATGATCAGAAAGTTGCTGA CGCTCTCTTTGATGCAGCTTCGGCATGGCTGCGAACCAAAGGTCTCAATGCTATGCGGGGACCCGTCAGTCCATCCATGA ACGACCAGTGCGGTATGCTGGTCAAAGGGTTTGACAGTGCTCCGGTGTTTCTCATGCTCTATAATCCCGAGTACTACAAT CGCCTTGTCGTCAATTACGGTCACAGCACAGGCCAGGAGTTGCTGGCGTGGTATATCGATCAGAAGAAGATCGATATCGG GCGTCTTCGCAAAATCGCGGCGCATGTTCAGAAGCGTGAGCAGTTGACCATCAGGACGATCAGAATGAACGATTTCCAGA ACGAGGTCGAAAAGATTCGTGATATCTATAACAAGGCATGGGAGAAGAACTGGGGTTTTGTGCCGATGACGGATAAAGAG TTCGATCACATGGCCAAAAGCCTCAAACCTATCGCCAAAGAACATTTTATCTATTTCGTCGAAGACCGTGACGGACGAAC GATCGGGTTCTCTCTGACCTTGCCCGATATGAATATCCCGCTCAAGCATGTCAACGGGAACCCCTTGACTCCTTGGGGGT TGTTCAAGTTCTGGTGGTATGGACGAAATATTTCCGCTTTCAGAACGATTACTATGGGCGTTCTTCCCGAATACCGCAAT AAGGGGATCGATAGTATGCTCAACGTCCATATTGCCGATTACGGCGGCAGGTTCGGTCTTTTTTCCAGCGAGATGAGCTG GGTGCTGAAGTCGAATGAGGCGATGAGCAAGCTTGCAAAGGTTATTGGCGGTATTCCATATAAGGAGTACGTGATTTACG AAAAGAGTATCTGA
Upstream 100 bases:
>100_bases ACCGTATCGTTGATAGTATGAAAGACCCCCTGTTGCAGGGGGTCTTTTCCTTGAAAATGTGCGATGGTTCACGAATTATG AACAATGAATCACAATCCTT
Downstream 100 bases:
>100_bases CGTACTCTGTCGTTTTTCCCCTCAAGGTGTTCAGCGCATCATTTTTTCTGCAGGCCCTCAATGCACGCTTTCAAACCGGC TTTCCTGAAGATGGTAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSIEIRRVEGKRDRKQFIRFAWDIYRKDERLNRYWVPPVISDYMKTLDTARYPLYDHADLALFTAWKNGQMAGTIAAIEN RRHNEVHQDKVGFWGFFECIDDQKVADALFDAASAWLRTKGLNAMRGPVSPSMNDQCGMLVKGFDSAPVFLMLYNPEYYN RLVVNYGHSTGQELLAWYIDQKKIDIGRLRKIAAHVQKREQLTIRTIRMNDFQNEVEKIRDIYNKAWEKNWGFVPMTDKE FDHMAKSLKPIAKEHFIYFVEDRDGRTIGFSLTLPDMNIPLKHVNGNPLTPWGLFKFWWYGRNISAFRTITMGVLPEYRN KGIDSMLNVHIADYGGRFGLFSSEMSWVLKSNEAMSKLAKVIGGIPYKEYVIYEKSI
Sequences:
>Translated_377_residues MSIEIRRVEGKRDRKQFIRFAWDIYRKDERLNRYWVPPVISDYMKTLDTARYPLYDHADLALFTAWKNGQMAGTIAAIEN RRHNEVHQDKVGFWGFFECIDDQKVADALFDAASAWLRTKGLNAMRGPVSPSMNDQCGMLVKGFDSAPVFLMLYNPEYYN RLVVNYGHSTGQELLAWYIDQKKIDIGRLRKIAAHVQKREQLTIRTIRMNDFQNEVEKIRDIYNKAWEKNWGFVPMTDKE FDHMAKSLKPIAKEHFIYFVEDRDGRTIGFSLTLPDMNIPLKHVNGNPLTPWGLFKFWWYGRNISAFRTITMGVLPEYRN KGIDSMLNVHIADYGGRFGLFSSEMSWVLKSNEAMSKLAKVIGGIPYKEYVIYEKSI >Mature_376_residues SIEIRRVEGKRDRKQFIRFAWDIYRKDERLNRYWVPPVISDYMKTLDTARYPLYDHADLALFTAWKNGQMAGTIAAIENR RHNEVHQDKVGFWGFFECIDDQKVADALFDAASAWLRTKGLNAMRGPVSPSMNDQCGMLVKGFDSAPVFLMLYNPEYYNR LVVNYGHSTGQELLAWYIDQKKIDIGRLRKIAAHVQKREQLTIRTIRMNDFQNEVEKIRDIYNKAWEKNWGFVPMTDKEF DHMAKSLKPIAKEHFIYFVEDRDGRTIGFSLTLPDMNIPLKHVNGNPLTPWGLFKFWWYGRNISAFRTITMGVLPEYRNK GIDSMLNVHIADYGGRFGLFSSEMSWVLKSNEAMSKLAKVIGGIPYKEYVIYEKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44076; Mature: 43945
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEIRRVEGKRDRKQFIRFAWDIYRKDERLNRYWVPPVISDYMKTLDTARYPLYDHADL CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCCCCE ALFTAWKNGQMAGTIAAIENRRHNEVHQDKVGFWGFFECIDDQKVADALFDAASAWLRTK EEEEEECCCCCEEEHHHHHCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHC GLNAMRGPVSPSMNDQCGMLVKGFDSAPVFLMLYNPEYYNRLVVNYGHSTGQELLAWYID CCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCHHHCEEEEECCCCCHHHHHHHHHC QKKIDIGRLRKIAAHVQKREQLTIRTIRMNDFQNEVEKIRDIYNKAWEKNWGFVPMTDKE CCCCCHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCHH FDHMAKSLKPIAKEHFIYFVEDRDGRTIGFSLTLPDMNIPLKHVNGNPLTPWGLFKFWWY HHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHC GRNISAFRTITMGVLPEYRNKGIDSMLNVHIADYGGRFGLFSSEMSWVLKSNEAMSKLAK CCCCHHHHHHHHHCCCHHHCCCCCHHHEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHH VIGGIPYKEYVIYEKSI HHCCCCCHHEEEEECCC >Mature Secondary Structure SIEIRRVEGKRDRKQFIRFAWDIYRKDERLNRYWVPPVISDYMKTLDTARYPLYDHADL CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCCCCE ALFTAWKNGQMAGTIAAIENRRHNEVHQDKVGFWGFFECIDDQKVADALFDAASAWLRTK EEEEEECCCCCEEEHHHHHCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHC GLNAMRGPVSPSMNDQCGMLVKGFDSAPVFLMLYNPEYYNRLVVNYGHSTGQELLAWYID CCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCHHHCEEEEECCCCCHHHHHHHHHC QKKIDIGRLRKIAAHVQKREQLTIRTIRMNDFQNEVEKIRDIYNKAWEKNWGFVPMTDKE CCCCCHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCHH FDHMAKSLKPIAKEHFIYFVEDRDGRTIGFSLTLPDMNIPLKHVNGNPLTPWGLFKFWWY HHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHC GRNISAFRTITMGVLPEYRNKGIDSMLNVHIADYGGRFGLFSSEMSWVLKSNEAMSKLAK CCCCHHHHHHHHHCCCHHHCCCCCHHHEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHH VIGGIPYKEYVIYEKSI HHCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]