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The map label for this gene is yifB [C]

Identifier: 194334088

GI number: 194334088

Start: 1387003

End: 1388058

Strand: Reverse

Name: yifB [C]

Synonym: Paes_1276

Alternate gene names: 194334088

Gene position: 1388058-1387003 (Counterclockwise)

Preceding gene: 194334089

Following gene: 194334087

Centisome position: 55.24

GC content: 55.4

Gene sequence:

>1056_bases
ATGAACAAACAGTACACCTATCCTTTTACCGCTATTGTCGGCCAGGAGCAGATGAAGCTGGCACTCGTTCTCAATATTAT
TACCCCAACGCTTTCCGGTGTTCTGATCCGTGGAGAGAAAGGAACCGCGAAATCGACTGCGGTCCGTGCTCTTGCCGATA
TTCTTCCTGAGATCGACGTGATCAGCGGCATTCCATTCAACCTCGCGCCTGATGAAGAGTCTGATGTTATCAGGGAGTGT
TTTGCCGTTGCAGGAGAGTTGCTGCCCGAAACAGGGACACCACTGCTCGTCGAAAAGCACAAGGTGAAGGTGGTCGAACT
GCCGGTAGGCGCAACAGAAGATCGTGTGGTGGGAACGCTTGACCTCGAGCATGCTCTGAAGGCCGGGGAAAAACGCATTG
AGCCGGGTCTGCTTGCCTCGGCTCACCGGGGAATTCTCTACGTCGACGAAGTGAATCTTCTCGATGATCACGTCGTCGAT
GTGCTGCTCGATTCGGCAGCCATGGGGGTGAATACCATCGAGCGGGAAGGAGTGTCGTTCGCCCATCCGGCCAGGTTCAC
GCTCGTGGGGACTATGAACCCTGAAGAAGGGGAGCTCCGCCCCCAGCTGCTCGACCGTTTCGGGTTGTGTGTGCACATAG
AAGGGATCTCCGATCCTGAGAAAAGGGTAGAGGTCATGGAGAGGCGATTTGCATTCGAGGAGGATCCTGAAACATTCTGC
CGTGCCTGGGCTGACGAGTCGGCCCGGCTGGTGGAAAGGATCGCTATGGCACGGAAGCTGTATTCGTCGGTCAGCGTCAG
CAGGGAGAACCTGATGGCGATTGCACAGTACTGCCTTGAAGTCGGGGTCGATGGCCATCGCGGGGATATCATTATCCTGA
AAACCGCAAAAACACTTGCCGCATACGATGCACGGGCAACGGTGGAAAAACAAGACATCGATCAGGCTGCGATGCTCGCA
CTTCCTCACCGTATCCGCCGCCAGCCCTTGCAGGATATTGTGATGGATGTTGGTTCCATGCTGAAGAACAAGGCGTGTGA
TCGGGTTTCGGGCTGA

Upstream 100 bases:

>100_bases
GTCTTGCCAGGAAAATTGCCGGTATGCTGCAGGCGGAATACTTCAAGATTGACGACCTGCAGGCAGATTCTCTTGTGAAC
ATTGTAAAAAACGCAACATC

Downstream 100 bases:

>100_bases
GCGCATTCCGGCGGTTTTCAACAACAAGAGATGGCTTATTCATGAAGACATTAGCGTTTTTTAACAATATTCACAGTTCG
GCTCTCTGGCACCAGCTTAC

Product: Magnesium chelatase

Products: ADP; phosphate; Mg-protoporphyrin IX; H+

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNKQYTYPFTAIVGQEQMKLALVLNIITPTLSGVLIRGEKGTAKSTAVRALADILPEIDVISGIPFNLAPDEESDVIREC
FAVAGELLPETGTPLLVEKHKVKVVELPVGATEDRVVGTLDLEHALKAGEKRIEPGLLASAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFAHPARFTLVGTMNPEEGELRPQLLDRFGLCVHIEGISDPEKRVEVMERRFAFEEDPETFC
RAWADESARLVERIAMARKLYSSVSVSRENLMAIAQYCLEVGVDGHRGDIIILKTAKTLAAYDARATVEKQDIDQAAMLA
LPHRIRRQPLQDIVMDVGSMLKNKACDRVSG

Sequences:

>Translated_351_residues
MNKQYTYPFTAIVGQEQMKLALVLNIITPTLSGVLIRGEKGTAKSTAVRALADILPEIDVISGIPFNLAPDEESDVIREC
FAVAGELLPETGTPLLVEKHKVKVVELPVGATEDRVVGTLDLEHALKAGEKRIEPGLLASAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFAHPARFTLVGTMNPEEGELRPQLLDRFGLCVHIEGISDPEKRVEVMERRFAFEEDPETFC
RAWADESARLVERIAMARKLYSSVSVSRENLMAIAQYCLEVGVDGHRGDIIILKTAKTLAAYDARATVEKQDIDQAAMLA
LPHRIRRQPLQDIVMDVGSMLKNKACDRVSG
>Mature_351_residues
MNKQYTYPFTAIVGQEQMKLALVLNIITPTLSGVLIRGEKGTAKSTAVRALADILPEIDVISGIPFNLAPDEESDVIREC
FAVAGELLPETGTPLLVEKHKVKVVELPVGATEDRVVGTLDLEHALKAGEKRIEPGLLASAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFAHPARFTLVGTMNPEEGELRPQLLDRFGLCVHIEGISDPEKRVEVMERRFAFEEDPETFC
RAWADESARLVERIAMARKLYSSVSVSRENLMAIAQYCLEVGVDGHRGDIIILKTAKTLAAYDARATVEKQDIDQAAMLA
LPHRIRRQPLQDIVMDVGSMLKNKACDRVSG

Specific function: Unknown

COG id: COG1239

COG function: function code H; Mg-chelatase subunit ChlI

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000523 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: 6.6.1.1

Molecular weight: Translated: 38616; Mature: 38616

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQYTYPFTAIVGQEQMKLALVLNIITPTLSGVLIRGEKGTAKSTAVRALADILPEIDV
CCCCCCCCHHEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHH
ISGIPFNLAPDEESDVIRECFAVAGELLPETGTPLLVEKHKVKVVELPVGATEDRVVGTL
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEE
DLEHALKAGEKRIEPGLLASAHRGILYVDEVNLLDDHVVDVLLDSAAMGVNTIEREGVSF
CHHHHHHCCHHHCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
AHPARFTLVGTMNPEEGELRPQLLDRFGLCVHIEGISDPEKRVEVMERRFAFEEDPETFC
CCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH
RAWADESARLVERIAMARKLYSSVSVSRENLMAIAQYCLEVGVDGHRGDIIILKTAKTLA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
AYDARATVEKQDIDQAAMLALPHRIRRQPLQDIVMDVGSMLKNKACDRVSG
HHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKQYTYPFTAIVGQEQMKLALVLNIITPTLSGVLIRGEKGTAKSTAVRALADILPEIDV
CCCCCCCCHHEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHH
ISGIPFNLAPDEESDVIRECFAVAGELLPETGTPLLVEKHKVKVVELPVGATEDRVVGTL
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEE
DLEHALKAGEKRIEPGLLASAHRGILYVDEVNLLDDHVVDVLLDSAAMGVNTIEREGVSF
CHHHHHHCCHHHCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
AHPARFTLVGTMNPEEGELRPQLLDRFGLCVHIEGISDPEKRVEVMERRFAFEEDPETFC
CCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH
RAWADESARLVERIAMARKLYSSVSVSRENLMAIAQYCLEVGVDGHRGDIIILKTAKTLA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
AYDARATVEKQDIDQAAMLALPHRIRRQPLQDIVMDVGSMLKNKACDRVSG
HHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; protoporphyrin IX; Mg2+; H2O

Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]