| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334012
Identifier: 194334012
GI number: 194334012
Start: 1302407
End: 1303261
Strand: Reverse
Name: 194334012
Synonym: Paes_1196
Alternate gene names: NA
Gene position: 1303261-1302407 (Counterclockwise)
Preceding gene: 194334014
Following gene: 194334010
Centisome position: 51.86
GC content: 50.64
Gene sequence:
>855_bases ATGAACCAGATAAGAACTTTTTTTGTGGTGATATGTATTAGCTTTCTGGCCGGTTGCGCTGAATTCAGGACCGTTACCGA GCAGGATTGGCCTTCCGAATCGGCAGGTCTGACCCCTGAACTGGCCCTGTTATACCGTGAGGTGGCGATTTCTTCCTCTG CACTTCATTCTCTTGACGGGTATGCAGATATCTGGATAAAGACCCCCCGGAGGCAGGAACGGGTCTACAGTAATATTCAG CTTAAGCGCTCGGAAGATATGCGTATTATCATCAGCGCGGGTATTCTCGGCTGGCCTGTTGCCGATATGCTTTTCCGGAC CGATTCTCTGTTCGTTCACGATATGCTCAACAACAGATTGCTCGTCGGACGCAATACTCCCGACAATATGGAGAAGATTC TCGGGATGCGTTCCGGTTATGAGTTTCTTTCAGATGCTCTTTTTGGGGTGGTCAGGCTTCAGGAGCCTCTGCGTGCGATC GAATCAGTGAAAACCGGAGCGGGTAAGGTCAGTTACACGATCAGGACTGCTTCAGGTAAACAGGAGGTGCTTGTTGACCC TCTGACAAAAACAATAGAGGCGCTTCAGGTATATGACCGCTCAGAGCGGCTTGTTATCGAGATGCATTTCAGGAGATTCA TGACCAGCAGGGTGGCAGGAGCTTCAGTGACCCTTCCGAGAGAGATCGAGTTGGCGCTCTATGACCAGCGCCTTGAGGGC AACGGTGCGCACGAGATGGTTATTGTCTATGATGAACGGCAGCTTAATCCGGAAGGGTTCACTATCAGGTACCGTGTTCC TGAAAAAGCAAGGGTTGTCAATCTTGACAGGGTTGGCATCCTTCCCTGGATGTAG
Upstream 100 bases:
>100_bases AGTGCTTTCGATGCGCCCGGTCCCGTCCATAGCTATAGCCGGGATGTTTTTTGAGTAACGTCTGTTTTGCTGTTGTTGAA GATATAATCATGTAGTCGAG
Downstream 100 bases:
>100_bases GCGCGAGAGGGGAAGAGGCAGTTCATTAAAAAAAAGGGGAAAGCTCTGTGCTTTCCCCTTTTTTACAGACCGTCAGGCGT TGTTGTTACGCACCGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNQIRTFFVVICISFLAGCAEFRTVTEQDWPSESAGLTPELALLYREVAISSSALHSLDGYADIWIKTPRRQERVYSNIQ LKRSEDMRIIISAGILGWPVADMLFRTDSLFVHDMLNNRLLVGRNTPDNMEKILGMRSGYEFLSDALFGVVRLQEPLRAI ESVKTGAGKVSYTIRTASGKQEVLVDPLTKTIEALQVYDRSERLVIEMHFRRFMTSRVAGASVTLPREIELALYDQRLEG NGAHEMVIVYDERQLNPEGFTIRYRVPEKARVVNLDRVGILPWM
Sequences:
>Translated_284_residues MNQIRTFFVVICISFLAGCAEFRTVTEQDWPSESAGLTPELALLYREVAISSSALHSLDGYADIWIKTPRRQERVYSNIQ LKRSEDMRIIISAGILGWPVADMLFRTDSLFVHDMLNNRLLVGRNTPDNMEKILGMRSGYEFLSDALFGVVRLQEPLRAI ESVKTGAGKVSYTIRTASGKQEVLVDPLTKTIEALQVYDRSERLVIEMHFRRFMTSRVAGASVTLPREIELALYDQRLEG NGAHEMVIVYDERQLNPEGFTIRYRVPEKARVVNLDRVGILPWM >Mature_284_residues MNQIRTFFVVICISFLAGCAEFRTVTEQDWPSESAGLTPELALLYREVAISSSALHSLDGYADIWIKTPRRQERVYSNIQ LKRSEDMRIIISAGILGWPVADMLFRTDSLFVHDMLNNRLLVGRNTPDNMEKILGMRSGYEFLSDALFGVVRLQEPLRAI ESVKTGAGKVSYTIRTASGKQEVLVDPLTKTIEALQVYDRSERLVIEMHFRRFMTSRVAGASVTLPREIELALYDQRLEG NGAHEMVIVYDERQLNPEGFTIRYRVPEKARVVNLDRVGILPWM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32389; Mature: 32389
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIRTFFVVICISFLAGCAEFRTVTEQDWPSESAGLTPELALLYREVAISSSALHSLDG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YADIWIKTPRRQERVYSNIQLKRSEDMRIIISAGILGWPVADMLFRTDSLFVHDMLNNRL CEEEEEECCCHHHHHHHCEEEECCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHCCEE LVGRNTPDNMEKILGMRSGYEFLSDALFGVVRLQEPLRAIESVKTGAGKVSYTIRTASGK EEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC QEVLVDPLTKTIEALQVYDRSERLVIEMHFRRFMTSRVAGASVTLPREIELALYDQRLEG CCEEHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCC NGAHEMVIVYDERQLNPEGFTIRYRVPEKARVVNLDRVGILPWM CCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNQIRTFFVVICISFLAGCAEFRTVTEQDWPSESAGLTPELALLYREVAISSSALHSLDG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YADIWIKTPRRQERVYSNIQLKRSEDMRIIISAGILGWPVADMLFRTDSLFVHDMLNNRL CEEEEEECCCHHHHHHHCEEEECCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHCCEE LVGRNTPDNMEKILGMRSGYEFLSDALFGVVRLQEPLRAIESVKTGAGKVSYTIRTASGK EEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC QEVLVDPLTKTIEALQVYDRSERLVIEMHFRRFMTSRVAGASVTLPREIELALYDQRLEG CCEEHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCC NGAHEMVIVYDERQLNPEGFTIRYRVPEKARVVNLDRVGILPWM CCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA