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The map label for this gene is ybhL [H]

Identifier: 194333989

GI number: 194333989

Start: 1281816

End: 1282538

Strand: Reverse

Name: ybhL [H]

Synonym: Paes_1173

Alternate gene names: 194333989

Gene position: 1282538-1281816 (Counterclockwise)

Preceding gene: 194333990

Following gene: 194333988

Centisome position: 51.04

GC content: 49.65

Gene sequence:

>723_bases
ATGATAGAACGAAATACTCTCAATCGAAGCGTTGCGGCACCGTCTGCTTCCGTGCTTCAGGATACTCAGACCCGGGTCAT
TAATCAGGTCTATACCTGGATGAGCCTCGGGTTGGCGCTCACGGCGACGGTCGGTTACTATACGGCAGGGACCGAAGCGT
TAAGAAATATTATTTTTTCCAATGGGATGGTGCTGATCGGCCTCGTTGTCGCCCAGCTTGGCATTGTTTTTGCTTTAAGC
GCTGCGATCAACCGACTGTCGGCTGCTGCTGCCACAGGGCTGTTCATTCTCTATGCGGCACTGACCGGCCTGACTTTTTC
AGCGATTTTTCTTGTCTATACCTCTGTTTCGATCGCCAGCACGTTTTTTGTGACAGCAGGAACCTTTGCTGCTATGACTG
TTTTCGGTCATACGACAAAGAGAGATCTGACAAAATTGGGCAGTATAGCATTCATGGCTCTTATCGGCATTATTCTGGCT
ACAGTCGTCAATATGTTCCTGCAGAATTCCCTGCTTGAGCTTATTGTCAGCGCTGTCGGCGTCCTTCTTTTCACTGCTCT
GACTGCCTATGACGCCCAGCGCATCAAGGATATGGCGGCTACAGTCAGCGGCGGGGAGTCTGAAGCCAAAGTTGCGGTGA
TGGGCGCACTTGCTCTTTATCTTGATTTTATCAACCTTTTTCTCATGCTGCTCCGTTTTCTGGGTGTTTCTCGAGATAAT
TGA

Upstream 100 bases:

>100_bases
CAATGTCGTTATCGATGAGGCTGTCGTTTGCGGCAAAATGGACAGGCTCGTGAGCGATCGCGACCTGAGCAGTTATATTC
TCTGATTAAAAACGTTATTC

Downstream 100 bases:

>100_bases
TGGCATCTGTGAGGCGGCAGAGCACTGTTTTCTTTAAAGAAAATATGCAACACTCTTCTCTTCTTGTACTCAACGGCCCG
AACCTTTCCCGGCTTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIERNTLNRSVAAPSASVLQDTQTRVINQVYTWMSLGLALTATVGYYTAGTEALRNIIFSNGMVLIGLVVAQLGIVFALS
AAINRLSAAAATGLFILYAALTGLTFSAIFLVYTSVSIASTFFVTAGTFAAMTVFGHTTKRDLTKLGSIAFMALIGIILA
TVVNMFLQNSLLELIVSAVGVLLFTALTAYDAQRIKDMAATVSGGESEAKVAVMGALALYLDFINLFLMLLRFLGVSRDN

Sequences:

>Translated_240_residues
MIERNTLNRSVAAPSASVLQDTQTRVINQVYTWMSLGLALTATVGYYTAGTEALRNIIFSNGMVLIGLVVAQLGIVFALS
AAINRLSAAAATGLFILYAALTGLTFSAIFLVYTSVSIASTFFVTAGTFAAMTVFGHTTKRDLTKLGSIAFMALIGIILA
TVVNMFLQNSLLELIVSAVGVLLFTALTAYDAQRIKDMAATVSGGESEAKVAVMGALALYLDFINLFLMLLRFLGVSRDN
>Mature_240_residues
MIERNTLNRSVAAPSASVLQDTQTRVINQVYTWMSLGLALTATVGYYTAGTEALRNIIFSNGMVLIGLVVAQLGIVFALS
AAINRLSAAAATGLFILYAALTGLTFSAIFLVYTSVSIASTFFVTAGTFAAMTVFGHTTKRDLTKLGSIAFMALIGIILA
TVVNMFLQNSLLELIVSAVGVLLFTALTAYDAQRIKDMAATVSGGESEAKVAVMGALALYLDFINLFLMLLRFLGVSRDN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=231, Percent_Identity=28.1385281385281, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1787004, Length=239, Percent_Identity=50.2092050209205, Blast_Score=223, Evalue=9e-60,
Organism=Drosophila melanogaster, GI45551091, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647735, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653225, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653221, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653223, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653227, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25462; Mature: 25462

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]