Click here to switch to the map view.

The map label for this gene is nlpI [C]

Identifier: 194333978

GI number: 194333978

Start: 1270494

End: 1271111

Strand: Reverse

Name: nlpI [C]

Synonym: Paes_1162

Alternate gene names: 194333978

Gene position: 1271111-1270494 (Counterclockwise)

Preceding gene: 194333981

Following gene: 194333977

Centisome position: 50.58

GC content: 47.57

Gene sequence:

>618_bases
ATGCGGCTAAAAAAAGAAAAATACAGCTGGTCGAAGTGGGCTATTGTTAAAAAAATTGCCAATGTGCTGCATGCAACATC
GTTTTTTTTGAAGAACAGGCTGCTGCTGGGAACGTTTTTTTCTGCAGTACGGAAGATCGGTATACGATATGCGATTGCTG
AGCTGTATTATAAAAAAGGTCTGAGAAAAAGCCGGGAGGGAGACTATAGCGCAGCTGCCACGCTTTTTTCAAGGGCTCTC
GATTTTCATCCGGGCCACACCAACGCCTATTTCAGCAGGGGCCTTATCCGGACAAGACGGGGAGACAATCCTGGTGCGCT
TGCTGATTACAGCAGGGTCATCGAACTCTATCCGGATGTATCGATGGTTTACAACAATAGAGGAATGGTGCGCAAAAAGA
CAGGTGACCAGAACGGGGCTCTTCAGGATTTTAATAAAGCGATAGAGCTTGATCCTGCCAATCCTTCGGCCTATTTTAAC
AGGGGACTGATTAAGATTGAGGGTCGGATGGATGCCCGTGCACTGGCCAATATCGTTCAGGCAGCACGTCTTGGCAATGA
CGAAGCGCGGACGTGGCTCGAAAATAGCGGATATCGATGGGAGTATGATTGCAATTGA

Upstream 100 bases:

>100_bases
GTGGCTGTTTGTCGATTTATACGTTTACATAGTAAAGTACTCTAACTGACCTTCCCTCTGTTGTTGCGCGGGTCAGAACT
GGTTAACTCTCTTTTGAGCG

Downstream 100 bases:

>100_bases
CTAGCTTTCTCTGTTTCATGTTTTGTTTTGTCAACGAGTTATCGTGACTGGATGATCATTATTTTCGGTCTGCATCTCGA
TAGCCAGAGGAGCTGGAAAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRLKKEKYSWSKWAIVKKIANVLHATSFFLKNRLLLGTFFSAVRKIGIRYAIAELYYKKGLRKSREGDYSAAATLFSRAL
DFHPGHTNAYFSRGLIRTRRGDNPGALADYSRVIELYPDVSMVYNNRGMVRKKTGDQNGALQDFNKAIELDPANPSAYFN
RGLIKIEGRMDARALANIVQAARLGNDEARTWLENSGYRWEYDCN

Sequences:

>Translated_205_residues
MRLKKEKYSWSKWAIVKKIANVLHATSFFLKNRLLLGTFFSAVRKIGIRYAIAELYYKKGLRKSREGDYSAAATLFSRAL
DFHPGHTNAYFSRGLIRTRRGDNPGALADYSRVIELYPDVSMVYNNRGMVRKKTGDQNGALQDFNKAIELDPANPSAYFN
RGLIKIEGRMDARALANIVQAARLGNDEARTWLENSGYRWEYDCN
>Mature_205_residues
MRLKKEKYSWSKWAIVKKIANVLHATSFFLKNRLLLGTFFSAVRKIGIRYAIAELYYKKGLRKSREGDYSAAATLFSRAL
DFHPGHTNAYFSRGLIRTRRGDNPGALADYSRVIELYPDVSMVYNNRGMVRKKTGDQNGALQDFNKAIELDPANPSAYFN
RGLIKIEGRMDARALANIVQAARLGNDEARTWLENSGYRWEYDCN

Specific function: May Be Involved In Cell Division. Overexpression Of Nlpi Results In The Loss Of The Rod Morphology And The Formation Of Single Prolate Ellipsoids And Pairs Of Prolate Ellipsoids Joined By Partial Constrictions. [C]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 23458; Mature: 23458

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKKEKYSWSKWAIVKKIANVLHATSFFLKNRLLLGTFFSAVRKIGIRYAIAELYYKKG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKSREGDYSAAATLFSRALDFHPGHTNAYFSRGLIRTRRGDNPGALADYSRVIELYPDV
HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCCC
SMVYNNRGMVRKKTGDQNGALQDFNKAIELDPANPSAYFNRGLIKIEGRMDARALANIVQ
EEEECCCCCEEECCCCCCCCHHHHHHHEECCCCCCHHHHCCCEEEECCCCCHHHHHHHHH
AARLGNDEARTWLENSGYRWEYDCN
HHHCCCHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MRLKKEKYSWSKWAIVKKIANVLHATSFFLKNRLLLGTFFSAVRKIGIRYAIAELYYKKG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKSREGDYSAAATLFSRALDFHPGHTNAYFSRGLIRTRRGDNPGALADYSRVIELYPDV
HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCCC
SMVYNNRGMVRKKTGDQNGALQDFNKAIELDPANPSAYFNRGLIKIEGRMDARALANIVQ
EEEECCCCCEEECCCCCCCCHHHHHHHEECCCCCCHHHHCCCEEEECCCCCHHHHHHHHH
AARLGNDEARTWLENSGYRWEYDCN
HHHCCCHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]