| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333977
Identifier: 194333977
GI number: 194333977
Start: 1267806
End: 1270442
Strand: Reverse
Name: 194333977
Synonym: Paes_1161
Alternate gene names: NA
Gene position: 1270442-1267806 (Counterclockwise)
Preceding gene: 194333978
Following gene: 194333976
Centisome position: 50.56
GC content: 52.83
Gene sequence:
>2637_bases ATGATCATTATTTTCGGTCTGCATCTCGATAGCCAGAGGAGCTGGAAAAAACGCGATGCATTCGGGCATCTTGAACTTGG TCCCTCAGGCTTGCTATCCCAGCTTGAGCAGTATCTTGGTCTTTCCTCTCCCCCGGCAGTGAAACTCCATCGACTGATTC ACTATCGCAGCATTCTGCAGCGTCTCGATAACGGCAGCAGGTTCTATAGCCGTTCGATGCAGGTCGATGATTTTGGGGTT GCATCCGCCCTTCTTGACATGAGAGACGATCTCTATCTTCACGGCTGGGATGGCTCGTACCGGCATCGACCGGTTACGAA ACGTCTTTCCGACCTTGCCGAGATAGAACGTGCGCTTCTCGAGGAAGAGGGATTCGAGCCTTGTAATGGGGAACGTTTGA TGTCGGTGTTGGAGGCATTGAAGGTGTTGCGAACTCCCATTACCGTTCTAAGGCTTCTGGAGCCTCTTGATCATCATCCC CGTCGGTGGCAGGAGGTGATCCGGTTGCTTCCGTTCTCATATTCCAATGCGTTTGACCGGCCGCTTGCCCGCGAGGGTTC CTCCCTGGCCTGTCTCCAGAAGCGTTTGCTAACTGATTCGCATTCATCCTCTGATCCGAAGGATATCGCAGACGCAAGCA TTCGGGTATTGACTGCAGATACGGCTCTTGCCGCAGCCTATTACGCGACAGCGACGTTATCGGCTTCGGCCGATGATGTT CTGCTCGTGCACGATGGTAAAGCCGGTTTACTGGATGATGTGCTTGCTGCAGAACATTTTCCTCAACAGGCTTTTTCGCA TTCATCTTCGTCACGTCCGGCATTGCAGCTCCTTCCACTGGCTCTTCGTCTTACTTTTCGCCCTCTTGATATTTCAGCTC TTCTTGCGTTTCTGACCCTTCCTGCCGGCATCAATCCTGTTCATCCCGTTCTGCGGGAGCGGATCGTCAGTATTGTTTCG CGTTATCCCGGAATTGGAGGAGAGGCATGGGTCAAAACCCTGATTGAATTTCGCAATGAGGGCGGAGAAGACGCTGATTC TAGCGTAAAGAGCTTTCTCGAATGGGTTGATGGAGCTACGCAAGACCGGCATGACGGTATGACGTCCGGACAGCTTATAG CGGTTACTTGTCGTGTAACCAATTTTTTTGATGAGCAGGTCAGGAGCCTCTCGGATGACTTGCTGAAAGAGGCCTGTTCG GCAGGTCTGGAGCAGGCGTCAGATTTTCTGTCTGCGCTCAAGACCATTCAACAGCATGGAACCTGCTGGCTGAGTATCTA TCAGATCGAGCAACTGCTGTCGAAAACGGGAGAAAAAAGCAGTCGAAAGTCCCTTTACGTTCGTCAGGCAGGGAGCGTTC CGGACGCATCCTGTCCTGGAGGTGTCTGCGAACCCTCTTCTCATGTGTTCTGGTGGTGGATGGCTGCGCCGTTGATTGAG CAAGGCGGGATATGGTCTTCCAGAGAGCGGGTTTTTCTTGAAGGTGAAGGGATTGTGTTTCCCTCTCAGGAGCAGAAGCT TCTTTGGCAGGAGGAAGAGTGGAAGCGTCCTGTTCTTGCTGCACGTCACTCTTTGACGCTGTTGCTGCCTCCGGACGAAA CGAAACGCCATCCGCTCTGGATGAAAATAGCATCGCTTTTTCCCTCGATACCTGTCATGCAGATCGAACACCCGCAAACA ACAGGCATAGCGTGTACACCTATTGTTCAGAGGCCTCTTGTTGCCCGCAAACCATTCTGGAGTGTTCCTGGAATAGTCCT TGGCAAAAAGCAGTCATTTTCACCGACATCCCTGGAGAAGCTCATTGCTGATCCCTGCCAATGGTTTCTTGAATACGAGG CAAAGCTGTCGCCGTCAAAGGTTCTCGATGTCAGTGATGGTCCGAGGCTCTACGGCCTTCTTTTTCATCGTATGGTCCAG AAGCTTTGCCCGGTTCTCCATGGTGGCAGCGTTACTATGAGCTCGATTGATGCATGGTTCGATGAGTGTTTTGCGATTCT CGTCAAACAGGAGGGAGCGGTGCTTTTGATGGAAGGCCGAAACGCGGACCTTGAAGGCCTCAGGCTCCGTATTCGTCATG CCTTGCATCACCTTGTTCCTGTTCTGGTAAGGCAGGGGGCCCGCAGTATTGTTGCAGAGCAGCGTTTGGATGGGCGCTTT GCGGGAGGCAACCTCTACGGTTATATCGATATTCTGCTTCATGATGATGAGGCTCGCCCCTCTGTTATCGATATGAAATG GGGCGGAGGGACCCGCCGTCGCCAGAGCCTTGCTGCAGGAACCCATCTTCAGCTTCTGGTTTATGCATGGCTTGTCTATC AGAAAACCGGACGCTGGCCTGCGCTGGCATACTTCATTGCATCACGGGCGGAGCTTCTTGCTGATACTGCCGGTTTTTTT GTCGCGGGTAACGCCGTCAGAACCGAAAACGACGAATCAGCCGCATTGCTCTGGGAGCGGGTTCTTGCAAGTTTCACATG GCGGATGGAGCAGATCGAGGCCGGCCGTCTTGCCGTTTCATGCGATCGCGAAGCAGGGGATGAGGATGGTTCTCCTCCTG AGGCATTGAAACCTCTTTTTGCATCAGCCATGTACAATCCCTACCGTTTTCTTGTGGGGTGGGGGGAGTGCTTATGA
Upstream 100 bases:
>100_bases GACGTGGCTCGAAAATAGCGGATATCGATGGGAGTATGATTGCAATTGACTAGCTTTCTCTGTTTCATGTTTTGTTTTGT CAACGAGTTATCGTGACTGG
Downstream 100 bases:
>100_bases AAAACGGTTCAATTACCTTTATCAGTGCTGGTGCAGGTTCTGGTAAAACTACCCGTTTGACAAGCATTCTCTATGAAAAG CTTCTCAGCGGAGAAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MIIIFGLHLDSQRSWKKRDAFGHLELGPSGLLSQLEQYLGLSSPPAVKLHRLIHYRSILQRLDNGSRFYSRSMQVDDFGV ASALLDMRDDLYLHGWDGSYRHRPVTKRLSDLAEIERALLEEEGFEPCNGERLMSVLEALKVLRTPITVLRLLEPLDHHP RRWQEVIRLLPFSYSNAFDRPLAREGSSLACLQKRLLTDSHSSSDPKDIADASIRVLTADTALAAAYYATATLSASADDV LLVHDGKAGLLDDVLAAEHFPQQAFSHSSSSRPALQLLPLALRLTFRPLDISALLAFLTLPAGINPVHPVLRERIVSIVS RYPGIGGEAWVKTLIEFRNEGGEDADSSVKSFLEWVDGATQDRHDGMTSGQLIAVTCRVTNFFDEQVRSLSDDLLKEACS AGLEQASDFLSALKTIQQHGTCWLSIYQIEQLLSKTGEKSSRKSLYVRQAGSVPDASCPGGVCEPSSHVFWWWMAAPLIE QGGIWSSRERVFLEGEGIVFPSQEQKLLWQEEEWKRPVLAARHSLTLLLPPDETKRHPLWMKIASLFPSIPVMQIEHPQT TGIACTPIVQRPLVARKPFWSVPGIVLGKKQSFSPTSLEKLIADPCQWFLEYEAKLSPSKVLDVSDGPRLYGLLFHRMVQ KLCPVLHGGSVTMSSIDAWFDECFAILVKQEGAVLLMEGRNADLEGLRLRIRHALHHLVPVLVRQGARSIVAEQRLDGRF AGGNLYGYIDILLHDDEARPSVIDMKWGGGTRRRQSLAAGTHLQLLVYAWLVYQKTGRWPALAYFIASRAELLADTAGFF VAGNAVRTENDESAALLWERVLASFTWRMEQIEAGRLAVSCDREAGDEDGSPPEALKPLFASAMYNPYRFLVGWGECL
Sequences:
>Translated_878_residues MIIIFGLHLDSQRSWKKRDAFGHLELGPSGLLSQLEQYLGLSSPPAVKLHRLIHYRSILQRLDNGSRFYSRSMQVDDFGV ASALLDMRDDLYLHGWDGSYRHRPVTKRLSDLAEIERALLEEEGFEPCNGERLMSVLEALKVLRTPITVLRLLEPLDHHP RRWQEVIRLLPFSYSNAFDRPLAREGSSLACLQKRLLTDSHSSSDPKDIADASIRVLTADTALAAAYYATATLSASADDV LLVHDGKAGLLDDVLAAEHFPQQAFSHSSSSRPALQLLPLALRLTFRPLDISALLAFLTLPAGINPVHPVLRERIVSIVS RYPGIGGEAWVKTLIEFRNEGGEDADSSVKSFLEWVDGATQDRHDGMTSGQLIAVTCRVTNFFDEQVRSLSDDLLKEACS AGLEQASDFLSALKTIQQHGTCWLSIYQIEQLLSKTGEKSSRKSLYVRQAGSVPDASCPGGVCEPSSHVFWWWMAAPLIE QGGIWSSRERVFLEGEGIVFPSQEQKLLWQEEEWKRPVLAARHSLTLLLPPDETKRHPLWMKIASLFPSIPVMQIEHPQT TGIACTPIVQRPLVARKPFWSVPGIVLGKKQSFSPTSLEKLIADPCQWFLEYEAKLSPSKVLDVSDGPRLYGLLFHRMVQ KLCPVLHGGSVTMSSIDAWFDECFAILVKQEGAVLLMEGRNADLEGLRLRIRHALHHLVPVLVRQGARSIVAEQRLDGRF AGGNLYGYIDILLHDDEARPSVIDMKWGGGTRRRQSLAAGTHLQLLVYAWLVYQKTGRWPALAYFIASRAELLADTAGFF VAGNAVRTENDESAALLWERVLASFTWRMEQIEAGRLAVSCDREAGDEDGSPPEALKPLFASAMYNPYRFLVGWGECL >Mature_878_residues MIIIFGLHLDSQRSWKKRDAFGHLELGPSGLLSQLEQYLGLSSPPAVKLHRLIHYRSILQRLDNGSRFYSRSMQVDDFGV ASALLDMRDDLYLHGWDGSYRHRPVTKRLSDLAEIERALLEEEGFEPCNGERLMSVLEALKVLRTPITVLRLLEPLDHHP RRWQEVIRLLPFSYSNAFDRPLAREGSSLACLQKRLLTDSHSSSDPKDIADASIRVLTADTALAAAYYATATLSASADDV LLVHDGKAGLLDDVLAAEHFPQQAFSHSSSSRPALQLLPLALRLTFRPLDISALLAFLTLPAGINPVHPVLRERIVSIVS RYPGIGGEAWVKTLIEFRNEGGEDADSSVKSFLEWVDGATQDRHDGMTSGQLIAVTCRVTNFFDEQVRSLSDDLLKEACS AGLEQASDFLSALKTIQQHGTCWLSIYQIEQLLSKTGEKSSRKSLYVRQAGSVPDASCPGGVCEPSSHVFWWWMAAPLIE QGGIWSSRERVFLEGEGIVFPSQEQKLLWQEEEWKRPVLAARHSLTLLLPPDETKRHPLWMKIASLFPSIPVMQIEHPQT TGIACTPIVQRPLVARKPFWSVPGIVLGKKQSFSPTSLEKLIADPCQWFLEYEAKLSPSKVLDVSDGPRLYGLLFHRMVQ KLCPVLHGGSVTMSSIDAWFDECFAILVKQEGAVLLMEGRNADLEGLRLRIRHALHHLVPVLVRQGARSIVAEQRLDGRF AGGNLYGYIDILLHDDEARPSVIDMKWGGGTRRRQSLAAGTHLQLLVYAWLVYQKTGRWPALAYFIASRAELLADTAGFF VAGNAVRTENDESAALLWERVLASFTWRMEQIEAGRLAVSCDREAGDEDGSPPEALKPLFASAMYNPYRFLVGWGECL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98031; Mature: 98031
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIFGLHLDSQRSWKKRDAFGHLELGPSGLLSQLEQYLGLSSPPAVKLHRLIHYRSILQ CEEEEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RLDNGSRFYSRSMQVDDFGVASALLDMRDDLYLHGWDGSYRHRPVTKRLSDLAEIERALL HHCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH EEEGFEPCNGERLMSVLEALKVLRTPITVLRLLEPLDHHPRRWQEVIRLLPFSYSNAFDR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC PLAREGSSLACLQKRLLTDSHSSSDPKDIADASIRVLTADTALAAAYYATATLSASADDV CHHHCCCHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHEECCCCCCE LLVHDGKAGLLDDVLAAEHFPQQAFSHSSSSRPALQLLPLALRLTFRPLDISALLAFLTL EEEECCCCCHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHC PAGINPVHPVLRERIVSIVSRYPGIGGEAWVKTLIEFRNEGGEDADSSVKSFLEWVDGAT CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC QDRHDGMTSGQLIAVTCRVTNFFDEQVRSLSDDLLKEACSAGLEQASDFLSALKTIQQHG CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TCWLSIYQIEQLLSKTGEKSSRKSLYVRQAGSVPDASCPGGVCEPSSHVFWWWMAAPLIE CEEEEHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH QGGIWSSRERVFLEGEGIVFPSQEQKLLWQEEEWKRPVLAARHSLTLLLPPDETKRHPLW CCCCCCCCCEEEECCCCEECCCCHHHHCCCCHHHCCHHHHHCCCEEEEECCCCCCCCHHH MKIASLFPSIPVMQIEHPQTTGIACTPIVQRPLVARKPFWSVPGIVLGKKQSFSPTSLEK HHHHHHCCCCCEEEECCCCCCCEEECHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHH LIADPCQWFLEYEAKLSPSKVLDVSDGPRLYGLLFHRMVQKLCPVLHGGSVTMSSIDAWF HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH DECFAILVKQEGAVLLMEGRNADLEGLRLRIRHALHHLVPVLVRQGARSIVAEQRLDGRF HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE AGGNLYGYIDILLHDDEARPSVIDMKWGGGTRRRQSLAAGTHLQLLVYAWLVYQKTGRWP CCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCH ALAYFIASRAELLADTAGFFVAGNAVRTENDESAALLWERVLASFTWRMEQIEAGRLAVS HHHHHHHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE CDREAGDEDGSPPEALKPLFASAMYNPYRFLVGWGECL ECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCCC >Mature Secondary Structure MIIIFGLHLDSQRSWKKRDAFGHLELGPSGLLSQLEQYLGLSSPPAVKLHRLIHYRSILQ CEEEEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RLDNGSRFYSRSMQVDDFGVASALLDMRDDLYLHGWDGSYRHRPVTKRLSDLAEIERALL HHCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH EEEGFEPCNGERLMSVLEALKVLRTPITVLRLLEPLDHHPRRWQEVIRLLPFSYSNAFDR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC PLAREGSSLACLQKRLLTDSHSSSDPKDIADASIRVLTADTALAAAYYATATLSASADDV CHHHCCCHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHEECCCCCCE LLVHDGKAGLLDDVLAAEHFPQQAFSHSSSSRPALQLLPLALRLTFRPLDISALLAFLTL EEEECCCCCHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHC PAGINPVHPVLRERIVSIVSRYPGIGGEAWVKTLIEFRNEGGEDADSSVKSFLEWVDGAT CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC QDRHDGMTSGQLIAVTCRVTNFFDEQVRSLSDDLLKEACSAGLEQASDFLSALKTIQQHG CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TCWLSIYQIEQLLSKTGEKSSRKSLYVRQAGSVPDASCPGGVCEPSSHVFWWWMAAPLIE CEEEEHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH QGGIWSSRERVFLEGEGIVFPSQEQKLLWQEEEWKRPVLAARHSLTLLLPPDETKRHPLW CCCCCCCCCEEEECCCCEECCCCHHHHCCCCHHHCCHHHHHCCCEEEEECCCCCCCCHHH MKIASLFPSIPVMQIEHPQTTGIACTPIVQRPLVARKPFWSVPGIVLGKKQSFSPTSLEK HHHHHHCCCCCEEEECCCCCCCEEECHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHH LIADPCQWFLEYEAKLSPSKVLDVSDGPRLYGLLFHRMVQKLCPVLHGGSVTMSSIDAWF HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH DECFAILVKQEGAVLLMEGRNADLEGLRLRIRHALHHLVPVLVRQGARSIVAEQRLDGRF HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE AGGNLYGYIDILLHDDEARPSVIDMKWGGGTRRRQSLAAGTHLQLLVYAWLVYQKTGRWP CCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCH ALAYFIASRAELLADTAGFFVAGNAVRTENDESAALLWERVLASFTWRMEQIEAGRLAVS HHHHHHHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE CDREAGDEDGSPPEALKPLFASAMYNPYRFLVGWGECL ECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA