| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194333951
Identifier: 194333951
GI number: 194333951
Start: 1238798
End: 1239130
Strand: Reverse
Name: 194333951
Synonym: Paes_1135
Alternate gene names: NA
Gene position: 1239130-1238798 (Counterclockwise)
Preceding gene: 194333952
Following gene: 194333950
Centisome position: 49.31
GC content: 46.85
Gene sequence:
>333_bases ATGTCAGATCAAATACATTCAGCTGAACAGATGGTAAGAAACTTCAAGGATCAACCATTCCTTGTCGATCGTCTCAAGAC AGATCCGAACCCGTTAACAGTTCTTGAGGAAGCAGCAAAAACAGCAATTCAGCAAACAGCCCCATGGACAGGCGACAGGA TTCTTTACCGTGTAGCTGTAATTGTCCTTGGCTCCCTTTGTCTTATTGCTGCCCTTGGCTCCATATTTTTAGTGTCCATC GGAAAGACTACACCTGAAGTACTCGTTGCGCTTGGCTCAGCTGCCGTCGGGGCATTAGTTGGTCTTTTCGCACCTACGCC AACGGGAAAATAA
Upstream 100 bases:
>100_bases GTTTTTTAGTGGTGATGATTTCTTGCATTTGAGCGACGTAAAACTCAACCAGGCTGTGTTGTGCAATCCAGCATATAACC AACAATCCAAGGAGCCGGCT
Downstream 100 bases:
>100_bases CTGCTATGCTTATTGCAAACGCTCCACTCTCATCCATAACAGGAGTGGGCATGCCATTTGTTCCGGAAGAAAAACCTCGT CTAAGCGCAACAGAGCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSDQIHSAEQMVRNFKDQPFLVDRLKTDPNPLTVLEEAAKTAIQQTAPWTGDRILYRVAVIVLGSLCLIAALGSIFLVSI GKTTPEVLVALGSAAVGALVGLFAPTPTGK
Sequences:
>Translated_110_residues MSDQIHSAEQMVRNFKDQPFLVDRLKTDPNPLTVLEEAAKTAIQQTAPWTGDRILYRVAVIVLGSLCLIAALGSIFLVSI GKTTPEVLVALGSAAVGALVGLFAPTPTGK >Mature_109_residues SDQIHSAEQMVRNFKDQPFLVDRLKTDPNPLTVLEEAAKTAIQQTAPWTGDRILYRVAVIVLGSLCLIAALGSIFLVSIG KTTPEVLVALGSAAVGALVGLFAPTPTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11645; Mature: 11514
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQIHSAEQMVRNFKDQPFLVDRLKTDPNPLTVLEEAAKTAIQQTAPWTGDRILYRVAV CCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVLGSLCLIAALGSIFLVSIGKTTPEVLVALGSAAVGALVGLFAPTPTGK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDQIHSAEQMVRNFKDQPFLVDRLKTDPNPLTVLEEAAKTAIQQTAPWTGDRILYRVAV CCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVLGSLCLIAALGSIFLVSIGKTTPEVLVALGSAAVGALVGLFAPTPTGK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA