| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is yjeB [C]
Identifier: 194333947
GI number: 194333947
Start: 1233730
End: 1234239
Strand: Reverse
Name: yjeB [C]
Synonym: Paes_1128
Alternate gene names: 194333947
Gene position: 1234239-1233730 (Counterclockwise)
Preceding gene: 194333948
Following gene: 194333946
Centisome position: 49.12
GC content: 49.02
Gene sequence:
>510_bases ATGATGCAGTTACTGACACAACATACCGATTACGCACTACGGGCATTGCTGATGCTTGCCGATCATCCGGATTCATACCT GTCTGCGCGTCATATTGCTGAAAAACAGGAGATACCCTACCAGTTTCTCAGGGGCCTTCTGCAGGAGATGCCACGCGAAG GATTGATATGTTCTCATGAAGGCGCTCATGGAGGGGTAGGGTTGAATCGGGATCCGGGCAGTATTTCAGTGCGCAATGTG ATCGAGCTTTTTCAGGGAAAGGTCGAACTGTCGGAATGCATGTTTCGCAAACAGTTGTGTTCCAATCGATCACGATGCGT GCTGCGCCACCAGATCATGAGGATCGAAAGCGTCGTCGCCAGAGAATTCGATCGCATAACGATCGGTTCATTGCTCAATG ATTTGCATGCGGTCGATAGGATGAATCACGAAACCTCAATCTCCCCTGCAATCTCGGGGATACTCACCAACACGCAGAAA TATCATGAAACGAACGATAGTCAGTATTGA
Upstream 100 bases:
>100_bases ACACAACCATCATCGCACCAGCATTCTTGCATGTGAGGATGAAATAATTTTTTTTTGGTTTTAATTGATACTATATTGAT ATCAGTTAAAAGAAGAATCA
Downstream 100 bases:
>100_bases TGAAGCGCTTTGTACCGGATGCGGCGAATGTATTCCCGGTTGCCCTGAGGGGGCATTGCAGGTTATCGACGGCAAGGCCC GCCTTGTCAGCGATCTCTTT
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Rrf2 Family Protein; Transcriptional Regulator; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein Transcriptional Regulator; BadM-Family Transcriptional Regulator; FeS Assembly SUF System Regulator
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MMQLLTQHTDYALRALLMLADHPDSYLSARHIAEKQEIPYQFLRGLLQEMPREGLICSHEGAHGGVGLNRDPGSISVRNV IELFQGKVELSECMFRKQLCSNRSRCVLRHQIMRIESVVAREFDRITIGSLLNDLHAVDRMNHETSISPAISGILTNTQK YHETNDSQY
Sequences:
>Translated_169_residues MMQLLTQHTDYALRALLMLADHPDSYLSARHIAEKQEIPYQFLRGLLQEMPREGLICSHEGAHGGVGLNRDPGSISVRNV IELFQGKVELSECMFRKQLCSNRSRCVLRHQIMRIESVVAREFDRITIGSLLNDLHAVDRMNHETSISPAISGILTNTQK YHETNDSQY >Mature_169_residues MMQLLTQHTDYALRALLMLADHPDSYLSARHIAEKQEIPYQFLRGLLQEMPREGLICSHEGAHGGVGLNRDPGSISVRNV IELFQGKVELSECMFRKQLCSNRSRCVLRHQIMRIESVVAREFDRITIGSLLNDLHAVDRMNHETSISPAISGILTNTQK YHETNDSQY
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19274; Mature: 19274
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLLTQHTDYALRALLMLADHPDSYLSARHIAEKQEIPYQFLRGLLQEMPREGLICSHE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCC GAHGGVGLNRDPGSISVRNVIELFQGKVELSECMFRKQLCSNRSRCVLRHQIMRIESVVA CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH REFDRITIGSLLNDLHAVDRMNHETSISPAISGILTNTQKYHETNDSQY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMQLLTQHTDYALRALLMLADHPDSYLSARHIAEKQEIPYQFLRGLLQEMPREGLICSHE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCC GAHGGVGLNRDPGSISVRNVIELFQGKVELSECMFRKQLCSNRSRCVLRHQIMRIESVVA CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH REFDRITIGSLLNDLHAVDRMNHETSISPAISGILTNTQKYHETNDSQY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA