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The map label for this gene is ybhS [H]

Identifier: 194333927

GI number: 194333927

Start: 1216280

End: 1217386

Strand: Reverse

Name: ybhS [H]

Synonym: Paes_1107

Alternate gene names: 194333927

Gene position: 1217386-1216280 (Counterclockwise)

Preceding gene: 194333928

Following gene: 194333926

Centisome position: 48.45

GC content: 50.05

Gene sequence:

>1107_bases
ATGAACAGTTTTGCCGCATTCATGACCAAGGAGTTCTATCACATTCTGCGCGACCGGCGCAGTGCAATGATCCTCTTTGG
TATGCCGATCATTCAGCTGCTGCTGTTCGGCTATGCCATCCGCAATGAAATCCAGACTGTAAGAATTGCTATCATCGATC
AATCGCACGACCGGATAACCGAAGCAATAACCGATAAACTGCTCTCTTCAGGCCACTTCGTTCTTGTCGATACGTTCTCA
TCGGACGATGCCATCGAAGAAGGGTTCAAGTCAGGCGAGATCACTGAAGCGATTGTTTTTGAAGCAGGTTTCGGTCGTCG
TTTCGTCAGGGAGCAGGAAACGTCGGTTCAGATCATTACCGATGGGTCGAACCCGAACCTTGCCCGCATTGTGCTCAGCT
ATACAACGGCTGTCTTCATGGATTACCGGGCATCTCTCCTTCAGGGAGATGAAGAAGGCAAGGGTATAGCAGCCGAAACA
CTGATGCTCTTCAACCCTGAGCTGAAAAGCGTCTACCTGTTCGTTCCAGGACTGATAACCGTTATTCTCATGCTGGTTTC
AGCCCTGATGACGTCGATCAGCATCACAAGAGAAAAAGAGACCGGCACCATGGAAGTCCTCCTGGTTTCATCACTGAGAC
CCTACCAGATCATTATCGGCAAGGTCGTTCCATATCTGATGCTGTCGTTTATCAATGTCGTGACAGTGCTGATCATTGCA
AGGTTTGTCTTCGGGGTTCCTTGCCGGGGCAGTGTCACGCTCCTGCTTCTCGAATCGCTTCTCTTTATTCTTACCGCGTT
ATCTCTTGGTATTTTCATTTCAACAATAACCTCATCGCAGCAGGTGGCGATGATGATCTCACTCGGGGGATTGCTCCTGC
CGACGGTGATGCTGTCAGGCTTTATTTTTCCCGTTTCAAGTATGCCTCTGCCGCTTCAGATCATCAGCACTCTGATCCCG
GCACGGTGGTTTCTGGTGATTGTTCGCGGCATTATGCTCAAAGGGACCGGCATCGTCTATTTCTGGCAGGAGACCCTGGT
TCTTGCTTCAATGACCCTTGCGCTCGGAATCCTGAGCATCAGGAAGTTCTCCATACGATTGACCTGA

Upstream 100 bases:

>100_bases
CGCCACGTCATCTCAAAGAAACGTTTGACGTTCCATCCATGAACGAGGTTTTTCTCCGGCTTGCACGAAGCACCGGTGAT
GAAAAGAGGGAGGAGCGGCA

Downstream 100 bases:

>100_bases
ACAGGGGAGTGCATCGACTATGAGAACAATTGTCTTTCTCTTACGCAAAGAGTTTCTGCAAATATTCAGGAACAAGGGTA
TGCTGCCTATCATGTTTATC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNSFAAFMTKEFYHILRDRRSAMILFGMPIIQLLLFGYAIRNEIQTVRIAIIDQSHDRITEAITDKLLSSGHFVLVDTFS
SDDAIEEGFKSGEITEAIVFEAGFGRRFVREQETSVQIITDGSNPNLARIVLSYTTAVFMDYRASLLQGDEEGKGIAAET
LMLFNPELKSVYLFVPGLITVILMLVSALMTSISITREKETGTMEVLLVSSLRPYQIIIGKVVPYLMLSFINVVTVLIIA
RFVFGVPCRGSVTLLLLESLLFILTALSLGIFISTITSSQQVAMMISLGGLLLPTVMLSGFIFPVSSMPLPLQIISTLIP
ARWFLVIVRGIMLKGTGIVYFWQETLVLASMTLALGILSIRKFSIRLT

Sequences:

>Translated_368_residues
MNSFAAFMTKEFYHILRDRRSAMILFGMPIIQLLLFGYAIRNEIQTVRIAIIDQSHDRITEAITDKLLSSGHFVLVDTFS
SDDAIEEGFKSGEITEAIVFEAGFGRRFVREQETSVQIITDGSNPNLARIVLSYTTAVFMDYRASLLQGDEEGKGIAAET
LMLFNPELKSVYLFVPGLITVILMLVSALMTSISITREKETGTMEVLLVSSLRPYQIIIGKVVPYLMLSFINVVTVLIIA
RFVFGVPCRGSVTLLLLESLLFILTALSLGIFISTITSSQQVAMMISLGGLLLPTVMLSGFIFPVSSMPLPLQIISTLIP
ARWFLVIVRGIMLKGTGIVYFWQETLVLASMTLALGILSIRKFSIRLT
>Mature_368_residues
MNSFAAFMTKEFYHILRDRRSAMILFGMPIIQLLLFGYAIRNEIQTVRIAIIDQSHDRITEAITDKLLSSGHFVLVDTFS
SDDAIEEGFKSGEITEAIVFEAGFGRRFVREQETSVQIITDGSNPNLARIVLSYTTAVFMDYRASLLQGDEEGKGIAAET
LMLFNPELKSVYLFVPGLITVILMLVSALMTSISITREKETGTMEVLLVSSLRPYQIIIGKVVPYLMLSFINVVTVLIIA
RFVFGVPCRGSVTLLLLESLLFILTALSLGIFISTITSSQQVAMMISLGGLLLPTVMLSGFIFPVSSMPLPLQIISTLIP
ARWFLVIVRGIMLKGTGIVYFWQETLVLASMTLALGILSIRKFSIRLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=338, Percent_Identity=31.6568047337278, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787010, Length=347, Percent_Identity=30.2593659942363, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI48994943, Length=365, Percent_Identity=30.4109589041096, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI226510979, Length=325, Percent_Identity=26.1538461538462, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24650855, Length=364, Percent_Identity=23.0769230769231, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24650853, Length=364, Percent_Identity=23.0769230769231, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI85725260, Length=377, Percent_Identity=20.4244031830239, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI85725262, Length=377, Percent_Identity=20.4244031830239, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40804; Mature: 40804

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFAAFMTKEFYHILRDRRSAMILFGMPIIQLLLFGYAIRNEIQTVRIAIIDQSHDRIT
CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHH
EAITDKLLSSGHFVLVDTFSSDDAIEEGFKSGEITEAIVFEAGFGRRFVREQETSVQIIT
HHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCHHHEEEECCCCHHHHHCCCCCEEEEE
DGSNPNLARIVLSYTTAVFMDYRASLLQGDEEGKGIAAETLMLFNPELKSVYLFVPGLIT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCHHHEEEHHHHHHH
VILMLVSALMTSISITREKETGTMEVLLVSSLRPYQIIIGKVVPYLMLSFINVVTVLIIA
HHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVFGVPCRGSVTLLLLESLLFILTALSLGIFISTITSSQQVAMMISLGGLLLPTVMLSG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FIFPVSSMPLPLQIISTLIPARWFLVIVRGIMLKGTGIVYFWQETLVLASMTLALGILSI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
RKFSIRLT
HHEEEEEC
>Mature Secondary Structure
MNSFAAFMTKEFYHILRDRRSAMILFGMPIIQLLLFGYAIRNEIQTVRIAIIDQSHDRIT
CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHH
EAITDKLLSSGHFVLVDTFSSDDAIEEGFKSGEITEAIVFEAGFGRRFVREQETSVQIIT
HHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCHHHEEEECCCCHHHHHCCCCCEEEEE
DGSNPNLARIVLSYTTAVFMDYRASLLQGDEEGKGIAAETLMLFNPELKSVYLFVPGLIT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCHHHEEEHHHHHHH
VILMLVSALMTSISITREKETGTMEVLLVSSLRPYQIIIGKVVPYLMLSFINVVTVLIIA
HHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVFGVPCRGSVTLLLLESLLFILTALSLGIFISTITSSQQVAMMISLGGLLLPTVMLSG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FIFPVSSMPLPLQIISTLIPARWFLVIVRGIMLKGTGIVYFWQETLVLASMTLALGILSI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
RKFSIRLT
HHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]