| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194333907
Identifier: 194333907
GI number: 194333907
Start: 1193379
End: 1195922
Strand: Reverse
Name: 194333907
Synonym: Paes_1085
Alternate gene names: NA
Gene position: 1195922-1193379 (Counterclockwise)
Preceding gene: 194333910
Following gene: 194333904
Centisome position: 47.59
GC content: 53.22
Gene sequence:
>2544_bases ATGAAGCTTGATCAGGAACGTCTTGGTTCATTTTACCTCGGGGCTGAATATAACCCCGAAACCGGAAAGCGCCTTGAACA ACCTGTTCATTACGACGCTCGCGATCTGACAACGCATGCTCTCTGCGTCGGCATGACAGGAAGTGGAAAAACCGGACTCT GCATCGGACTTCTCGAAGAGGCTGCGCTGGACCATATTCCGACGATCATGATCGATCCTAAAGGGGATATCACCAATCTG CTGTTGCAGTTTCCCGATATGAAACCCGAAGATTTCGAGCCATGGATCAATGAAGACGATGCGCGAAGAAAAGGCATGAG CAGGCAGGAATATGCCGCCGATACGGCTGAAACATGGCGAAACGGTCTTGCTGACTGGGGCATCGGGCCTGAAAGAATCC AGATGCTGAAAGAGTCCTCCGGGTTGACGATCTACACACCCGGTTCCGATGCCGGTGTCCCGATCAGTATTCTGGGAAGC CTGAAGTCACCAAAACTCTCCTTTGAAGAACATGGAGAAGCTATACGCGAAAGGATAACCGGAACTGTCAGCGCACTGCT CGGCCTGACCGGAATCAAGGCTGACCGAATCCGCAGCCGGGAGGCTATCCTTCTTGCTGCGATTTTCGATCATTTCTGGC GACAAGGTGAAGATATCGACCTTCAGCGGCTGATTCTCTCTATTCAGACCCCTCCTCTTCGACAGATCGGCGTCTTCGAC ACCGATACATTCTTTCCTGAGAAAGAGCGTTTCGATATGGCTCTGGCATTTAACAACCTGCTTGCCTCTCCAGGTTTCCA GGGATGGCTGGAAGGGGAATCGCTCGACATCGACACGCTGATGTATAGCGCTGAGGGAAAACCCCGTCAGAGCATTTTTT ATCTGGCCCATCTCAACGAGAGCGAGCGAATGTTTTTCGTGACCCTGCTTCTGGAAAACATGCTGACATGGATGCGAGCG CAGTCGGGGACGACAAGTCTCAGGGCACTGCTGTATTTCGACGAGGTATTCGGTTTTCTCCCTCCCGTTTCCGAACCATC TTCGAAACGTCCGCTGATGACCATGCTCAAACAGGCAAGAGCATTCGGTCTTGGCTGTGTTCTGGTGACCCAGAACCCTG TCGATGTCGACTATAAAGCGCTGACAAACACGGGAACCTGGTTCATTGGAAAACTGCAGGCCGAGCGGGATAAAGCAAGG GTTCTTGAAGGATTGAAAAACGCCATCTCCCAGGCAGGCGGCAATGGCGATGCCGTCGATTATGACGCGCTTATTACCGG GCTCGGGAGCAGAGTCTTCCTGATGCATAACATCCACGAGGACAAGCCGGTTATTTTTCATACCCGCTGGGCTATGAGCT ACCTCCGGGGCCCTCTGACAAGACCGCAGGTTCGCAGACTCATGGATGAGGCCGGAAGAGAGGCTTCACCGAAAAGAGCA CCAGGGCCATCAACGTCTCTACCGTCCAGGTCTGCCAAGGCCGCTTTGGCGTCGCATGAACCTCCTGCAGGCTACAGTGC TTCAGCCCCTGTTCTTGGAGCATCGTTGCGGCCGCTTTTCCTCCCGGTTCGCATCAGTCGCGATGAAGCTGTTGCCGCTG TCAATGAAGAACACCGGGGCGGCCTGCAGCATATCGATGCCGTACTCCTCTATGAACCGGCTCTGCTTGGCGATGCAGAT GTCCATTTTTTCGATAAAAAACGAGGCATTCAGGAAAAAACACGCACTCGCCTTCTGCTTCCCCTCCACGCAGCAGACGA TGCGCCGGACTGGAATGACGCCGATTCCATCCCGCTTGACGAGCACCGCCTTGAGGGCGAACCGGGAGTTTTCGAACCCG AAGAAGGTCCCTTTTTCGGGGCTGTCCCGCAATCTGTCAATTCATCGAGAGAGATGTCGGGAATGCAGAAAAAACTTGCC GATATGCTCTATTACTCGGCAAAACAACAGATCAACGTCCATCCCGATCTCGATATCTTTCAGCATCCGGATGAAACGCA AAGGAATTTCCTGATCCGCCTCCAGCAGGCCGCCAGAGAACGTCGCGACCAGCAGGTTGACAAGCTTGAGGAAAAGTATG CCAAACAGATCCATCGGCTTCAGGACAAGCTTCGTAAAGAAGAGCGGGAACTGGCTGAAGACGAAATGGAACATCAGAAC CGCCGCAACTCAGAACTGATCGGCATCGGAGAAACGGTCCTTGGTTTCTTCATGGGACGACGCAGTACGAGAGGGGTGTC TGGAGCGCTGAACAGACGACGAATGACCGCTAAAGCAAAAGCAGATATCGAGGAGTCTCATGAGGAAATTGCCCTTTTGG AGGAAGAGATCCGCGATCTGCAATCAGCAATGGAAAGCGAGGTGAAGCAGATTACCAGCCGGTGGGAAAATGTCGAACAG GAACTGGTCAGTGAAGAGCTTTCGCCAAGAAGAACGGATATCGATGTACACAGAGTGACCCTCGTCTGGCGTCCTTACTG GCGCATGAGCTTCGACAATGGAAGCGGAGCGCACAACACAACAATTCCGGCATGCGAGCTCTGA
Upstream 100 bases:
>100_bases CCCTGGCATCCAATGCGGCGATGAAAAAAGAATCACTGGAGGAGCGTTTACCAGGCGATCGGCCGGGCTGATGCAGAGGA AATTAAACAAAGGAGAATTG
Downstream 100 bases:
>100_bases AAAACCGGCAGCCGAACCATCATAATCAGACCTGCGATTGACGATGCCTGAGAAACAGTACTCCCATGAGGACAATAACG GCACCCGCCGAAGCCCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MKLDQERLGSFYLGAEYNPETGKRLEQPVHYDARDLTTHALCVGMTGSGKTGLCIGLLEEAALDHIPTIMIDPKGDITNL LLQFPDMKPEDFEPWINEDDARRKGMSRQEYAADTAETWRNGLADWGIGPERIQMLKESSGLTIYTPGSDAGVPISILGS LKSPKLSFEEHGEAIRERITGTVSALLGLTGIKADRIRSREAILLAAIFDHFWRQGEDIDLQRLILSIQTPPLRQIGVFD TDTFFPEKERFDMALAFNNLLASPGFQGWLEGESLDIDTLMYSAEGKPRQSIFYLAHLNESERMFFVTLLLENMLTWMRA QSGTTSLRALLYFDEVFGFLPPVSEPSSKRPLMTMLKQARAFGLGCVLVTQNPVDVDYKALTNTGTWFIGKLQAERDKAR VLEGLKNAISQAGGNGDAVDYDALITGLGSRVFLMHNIHEDKPVIFHTRWAMSYLRGPLTRPQVRRLMDEAGREASPKRA PGPSTSLPSRSAKAALASHEPPAGYSASAPVLGASLRPLFLPVRISRDEAVAAVNEEHRGGLQHIDAVLLYEPALLGDAD VHFFDKKRGIQEKTRTRLLLPLHAADDAPDWNDADSIPLDEHRLEGEPGVFEPEEGPFFGAVPQSVNSSREMSGMQKKLA DMLYYSAKQQINVHPDLDIFQHPDETQRNFLIRLQQAARERRDQQVDKLEEKYAKQIHRLQDKLRKEERELAEDEMEHQN RRNSELIGIGETVLGFFMGRRSTRGVSGALNRRRMTAKAKADIEESHEEIALLEEEIRDLQSAMESEVKQITSRWENVEQ ELVSEELSPRRTDIDVHRVTLVWRPYWRMSFDNGSGAHNTTIPACEL
Sequences:
>Translated_847_residues MKLDQERLGSFYLGAEYNPETGKRLEQPVHYDARDLTTHALCVGMTGSGKTGLCIGLLEEAALDHIPTIMIDPKGDITNL LLQFPDMKPEDFEPWINEDDARRKGMSRQEYAADTAETWRNGLADWGIGPERIQMLKESSGLTIYTPGSDAGVPISILGS LKSPKLSFEEHGEAIRERITGTVSALLGLTGIKADRIRSREAILLAAIFDHFWRQGEDIDLQRLILSIQTPPLRQIGVFD TDTFFPEKERFDMALAFNNLLASPGFQGWLEGESLDIDTLMYSAEGKPRQSIFYLAHLNESERMFFVTLLLENMLTWMRA QSGTTSLRALLYFDEVFGFLPPVSEPSSKRPLMTMLKQARAFGLGCVLVTQNPVDVDYKALTNTGTWFIGKLQAERDKAR VLEGLKNAISQAGGNGDAVDYDALITGLGSRVFLMHNIHEDKPVIFHTRWAMSYLRGPLTRPQVRRLMDEAGREASPKRA PGPSTSLPSRSAKAALASHEPPAGYSASAPVLGASLRPLFLPVRISRDEAVAAVNEEHRGGLQHIDAVLLYEPALLGDAD VHFFDKKRGIQEKTRTRLLLPLHAADDAPDWNDADSIPLDEHRLEGEPGVFEPEEGPFFGAVPQSVNSSREMSGMQKKLA DMLYYSAKQQINVHPDLDIFQHPDETQRNFLIRLQQAARERRDQQVDKLEEKYAKQIHRLQDKLRKEERELAEDEMEHQN RRNSELIGIGETVLGFFMGRRSTRGVSGALNRRRMTAKAKADIEESHEEIALLEEEIRDLQSAMESEVKQITSRWENVEQ ELVSEELSPRRTDIDVHRVTLVWRPYWRMSFDNGSGAHNTTIPACEL >Mature_847_residues MKLDQERLGSFYLGAEYNPETGKRLEQPVHYDARDLTTHALCVGMTGSGKTGLCIGLLEEAALDHIPTIMIDPKGDITNL LLQFPDMKPEDFEPWINEDDARRKGMSRQEYAADTAETWRNGLADWGIGPERIQMLKESSGLTIYTPGSDAGVPISILGS LKSPKLSFEEHGEAIRERITGTVSALLGLTGIKADRIRSREAILLAAIFDHFWRQGEDIDLQRLILSIQTPPLRQIGVFD TDTFFPEKERFDMALAFNNLLASPGFQGWLEGESLDIDTLMYSAEGKPRQSIFYLAHLNESERMFFVTLLLENMLTWMRA QSGTTSLRALLYFDEVFGFLPPVSEPSSKRPLMTMLKQARAFGLGCVLVTQNPVDVDYKALTNTGTWFIGKLQAERDKAR VLEGLKNAISQAGGNGDAVDYDALITGLGSRVFLMHNIHEDKPVIFHTRWAMSYLRGPLTRPQVRRLMDEAGREASPKRA PGPSTSLPSRSAKAALASHEPPAGYSASAPVLGASLRPLFLPVRISRDEAVAAVNEEHRGGLQHIDAVLLYEPALLGDAD VHFFDKKRGIQEKTRTRLLLPLHAADDAPDWNDADSIPLDEHRLEGEPGVFEPEEGPFFGAVPQSVNSSREMSGMQKKLA DMLYYSAKQQINVHPDLDIFQHPDETQRNFLIRLQQAARERRDQQVDKLEEKYAKQIHRLQDKLRKEERELAEDEMEHQN RRNSELIGIGETVLGFFMGRRSTRGVSGALNRRRMTAKAKADIEESHEEIALLEEEIRDLQSAMESEVKQITSRWENVEQ ELVSEELSPRRTDIDVHRVTLVWRPYWRMSFDNGSGAHNTTIPACEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95334; Mature: 95334
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDQERLGSFYLGAEYNPETGKRLEQPVHYDARDLTTHALCVGMTGSGKTGLCIGLLEE CCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHH AALDHIPTIMIDPKGDITNLLLQFPDMKPEDFEPWINEDDARRKGMSRQEYAADTAETWR HHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH NGLADWGIGPERIQMLKESSGLTIYTPGSDAGVPISILGSLKSPKLSFEEHGEAIRERIT CCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHH GTVSALLGLTGIKADRIRSREAILLAAIFDHFWRQGEDIDLQRLILSIQTPPLRQIGVFD HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC TDTFFPEKERFDMALAFNNLLASPGFQGWLEGESLDIDTLMYSAEGKPRQSIFYLAHLNE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCC SERMFFVTLLLENMLTWMRAQSGTTSLRALLYFDEVFGFLPPVSEPSSKRPLMTMLKQAR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFGLGCVLVTQNPVDVDYKALTNTGTWFIGKLQAERDKARVLEGLKNAISQAGGNGDAVD HHCCEEEEEECCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH YDALITGLGSRVFLMHNIHEDKPVIFHTRWAMSYLRGPLTRPQVRRLMDEAGREASPKRA HHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC PGPSTSLPSRSAKAALASHEPPAGYSASAPVLGASLRPLFLPVRISRDEAVAAVNEEHRG CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCHHHCC GLQHIDAVLLYEPALLGDADVHFFDKKRGIQEKTRTRLLLPLHAADDAPDWNDADSIPLD CHHHHHHHHEECCCCCCCCCCEEEHHHCCHHHHHHCEEEEEEECCCCCCCCCCCCCCCCH EHRLEGEPGVFEPEEGPFFGAVPQSVNSSREMSGMQKKLADMLYYSAKQQINVHPDLDIF HHHCCCCCCCCCCCCCCEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QHPDETQRNFLIRLQQAARERRDQQVDKLEEKYAKQIHRLQDKLRKEERELAEDEMEHQN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RRNSELIGIGETVLGFFMGRRSTRGVSGALNRRRMTAKAKADIEESHEEIALLEEEIRDL CCCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAMESEVKQITSRWENVEQELVSEELSPRRTDIDVHRVTLVWRPYWRMSFDNGSGAHNT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCC TIPACEL CCCCCCC >Mature Secondary Structure MKLDQERLGSFYLGAEYNPETGKRLEQPVHYDARDLTTHALCVGMTGSGKTGLCIGLLEE CCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHH AALDHIPTIMIDPKGDITNLLLQFPDMKPEDFEPWINEDDARRKGMSRQEYAADTAETWR HHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH NGLADWGIGPERIQMLKESSGLTIYTPGSDAGVPISILGSLKSPKLSFEEHGEAIRERIT CCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHH GTVSALLGLTGIKADRIRSREAILLAAIFDHFWRQGEDIDLQRLILSIQTPPLRQIGVFD HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC TDTFFPEKERFDMALAFNNLLASPGFQGWLEGESLDIDTLMYSAEGKPRQSIFYLAHLNE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCC SERMFFVTLLLENMLTWMRAQSGTTSLRALLYFDEVFGFLPPVSEPSSKRPLMTMLKQAR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFGLGCVLVTQNPVDVDYKALTNTGTWFIGKLQAERDKARVLEGLKNAISQAGGNGDAVD HHCCEEEEEECCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH YDALITGLGSRVFLMHNIHEDKPVIFHTRWAMSYLRGPLTRPQVRRLMDEAGREASPKRA HHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC PGPSTSLPSRSAKAALASHEPPAGYSASAPVLGASLRPLFLPVRISRDEAVAAVNEEHRG CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCHHHCC GLQHIDAVLLYEPALLGDADVHFFDKKRGIQEKTRTRLLLPLHAADDAPDWNDADSIPLD CHHHHHHHHEECCCCCCCCCCEEEHHHCCHHHHHHCEEEEEEECCCCCCCCCCCCCCCCH EHRLEGEPGVFEPEEGPFFGAVPQSVNSSREMSGMQKKLADMLYYSAKQQINVHPDLDIF HHHCCCCCCCCCCCCCCEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QHPDETQRNFLIRLQQAARERRDQQVDKLEEKYAKQIHRLQDKLRKEERELAEDEMEHQN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RRNSELIGIGETVLGFFMGRRSTRGVSGALNRRRMTAKAKADIEESHEEIALLEEEIRDL CCCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAMESEVKQITSRWENVEQELVSEELSPRRTDIDVHRVTLVWRPYWRMSFDNGSGAHNT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCC TIPACEL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA