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The map label for this gene is gph [C]

Identifier: 194333767

GI number: 194333767

Start: 1034802

End: 1035461

Strand: Reverse

Name: gph [C]

Synonym: Paes_0937

Alternate gene names: 194333767

Gene position: 1035461-1034802 (Counterclockwise)

Preceding gene: 194333768

Following gene: 194333765

Centisome position: 41.21

GC content: 51.21

Gene sequence:

>660_bases
ATGATCTTCAAGGCCGTTATTTTCGATCTCGACGGAACGCTTCTGGATTCGCTCCAGGACCTCGCAGAAACACTCAACAC
CGTTCTTTCATTACACGGTTTGCCTGTCCATGAACTCAATGAATACCGGCTTCTTGTCGGATACGGCATGCAGGAACTCG
TCCGCAAAGCGGTTCCGGAAAAACTCAACAGCGACGATGCATTGATAGACACGCTTCTGGGGGAAATGAAGGAAAAGTAC
TCCAGAACCTGGAAAAACAACACCCGACCCTATCCGGGTATAGCTGAACTCCTGGACTGGCTGGCCAGGACTGGCCTGAA
AAAAGGGATTTTGTCCAATAAACCGGATGAATTCACCAAGCTGTGCGTCGAAACACTTCTTTCATCCTGGCAGTTCGATC
TGGTTATGGGACACCATGAAGGCATCCGGCACAAACCCGACCCGGAAGGAGCGCTTCAGATAGCAGCCACGTTCGGCTGT
TCCCCCGAAGAGATTCTCTATATCGGTGACAGCAGCGTCGACATGCAGACAGCAAAAGCTGCAGGGATGTTTCCCCTGGG
TGTACTATGGGGGTTCCGCAGTGAAGAAGAACTGAGGAACCATGGAGCCGGAGCACTGGCAAAGGTCCCGGATGATATAA
GAAAATACCTTTCGCGATAA

Upstream 100 bases:

>100_bases
CACAAAAACCAATCGTGCTGGTAAAGAAAAAACCTACACCATCTTCCTGGCTGTTGCAGAAGCACCGAACTGTTAACGCC
ATAAACCAATCACCATATTT

Downstream 100 bases:

>100_bases
GAAAAGGTTCAGAAGATCAGAATCGCCACTCAATGATGCGGACAAGCTCGACAGGTTTTTCCTGTACCGGTGTCCCTATA
AACTGGCAATTTTCGTCTTC

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIFKAVIFDLDGTLLDSLQDLAETLNTVLSLHGLPVHELNEYRLLVGYGMQELVRKAVPEKLNSDDALIDTLLGEMKEKY
SRTWKNNTRPYPGIAELLDWLARTGLKKGILSNKPDEFTKLCVETLLSSWQFDLVMGHHEGIRHKPDPEGALQIAATFGC
SPEEILYIGDSSVDMQTAKAAGMFPLGVLWGFRSEEELRNHGAGALAKVPDDIRKYLSR

Sequences:

>Translated_219_residues
MIFKAVIFDLDGTLLDSLQDLAETLNTVLSLHGLPVHELNEYRLLVGYGMQELVRKAVPEKLNSDDALIDTLLGEMKEKY
SRTWKNNTRPYPGIAELLDWLARTGLKKGILSNKPDEFTKLCVETLLSSWQFDLVMGHHEGIRHKPDPEGALQIAATFGC
SPEEILYIGDSSVDMQTAKAAGMFPLGVLWGFRSEEELRNHGAGALAKVPDDIRKYLSR
>Mature_219_residues
MIFKAVIFDLDGTLLDSLQDLAETLNTVLSLHGLPVHELNEYRLLVGYGMQELVRKAVPEKLNSDDALIDTLLGEMKEKY
SRTWKNNTRPYPGIAELLDWLARTGLKKGILSNKPDEFTKLCVETLLSSWQFDLVMGHHEGIRHKPDPEGALQIAATFGC
SPEEILYIGDSSVDMQTAKAAGMFPLGVLWGFRSEEELRNHGAGALAKVPDDIRKYLSR

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24483; Mature: 24483

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKAVIFDLDGTLLDSLQDLAETLNTVLSLHGLPVHELNEYRLLVGYGMQELVRKAVPE
CCHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHHHHHHH
KLNSDDALIDTLLGEMKEKYSRTWKNNTRPYPGIAELLDWLARTGLKKGILSNKPDEFTK
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LCVETLLSSWQFDLVMGHHEGIRHKPDPEGALQIAATFGCSPEEILYIGDSSVDMQTAKA
HHHHHHHHCCCHHHEECCCCCCCCCCCCCHHEEEHHHCCCCCCCEEEECCCCCCHHHHHH
AGMFPLGVLWGFRSEEELRNHGAGALAKVPDDIRKYLSR
CCCCHHHHHHCCCCHHHHHHCCCCCHHCCCHHHHHHHCC
>Mature Secondary Structure
MIFKAVIFDLDGTLLDSLQDLAETLNTVLSLHGLPVHELNEYRLLVGYGMQELVRKAVPE
CCHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHHHHHHH
KLNSDDALIDTLLGEMKEKYSRTWKNNTRPYPGIAELLDWLARTGLKKGILSNKPDEFTK
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LCVETLLSSWQFDLVMGHHEGIRHKPDPEGALQIAATFGCSPEEILYIGDSSVDMQTAKA
HHHHHHHHCCCHHHEECCCCCCCCCCCCCHHEEEHHHCCCCCCCEEEECCCCCCHHHHHH
AGMFPLGVLWGFRSEEELRNHGAGALAKVPDDIRKYLSR
CCCCHHHHHHCCCCHHHHHHCCCCCHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]