| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333743
Identifier: 194333743
GI number: 194333743
Start: 1002124
End: 1003674
Strand: Reverse
Name: 194333743
Synonym: Paes_0913
Alternate gene names: NA
Gene position: 1003674-1002124 (Counterclockwise)
Preceding gene: 194333748
Following gene: 194333738
Centisome position: 39.94
GC content: 49.52
Gene sequence:
>1551_bases ATGCTCTTCACCGCATTGCAGAACCCCGGGTCCTACCCGCATGATGTAGCGTCGGTCACCGTCGTTGAAACGCATATTTC CATGGTGTTTCTGACAGGAACCTATGCCTACAAAGTCAAAAAACCGGTTGATCTCGGATTTCTTGACTTTTCGACTCTTG AAAAAAGAAAGCAGTTCTGCCTTGAAGAGCTGAGGCTCAACAGAAGGCTCTGCCCTGACCTCTATCTCGACGTGCTACCC ATCACTGAAGACAATGGACTGATAACGGTAGGCGGCAAAGGAAACGTTCTGGAATATGCGGTTCAGATGCTGGAGTTCGA CCGGACAATGGAGCTTGATCTGCTCCTGAAAGAACATCGACTCACACCCGCTCATATTGACATGATCAGTGCGATTGTTT CCGGCTTTCATCAGGCACTTTCGCCTTCCCCCCCAGGTTCCCCCTACGCAACTCCGGCACTGATCCTGCAAACCGTCCTC AACAACTTTTCAAGGATAGAGACTGGCAACTGTTCGGATGATGAATCAGAAAGACTCGAGAAGCTGAAAGTGTGGACCGT CAGAGCTCATGAACAATGCTCTTTACTCTTTGAAAAACGCAAACGCGAAGGGCTTGTCCGTCAATGTCATGGAGACATGC ATAGCGGCAATATGGTCCTGAGAAACGGCGGTATCTGTATTTTTGACTGTATTGAGTTCAATCCGGAACTCAGCGTTATT GACCTGTTCAGCGAAATAGCATTTTTTATCATGGACCTGGAGCACCGTTGCCACCCTGAACTGGCCTGGAGATTTCTCAA CGCCTATCTCTCTGCCACAGGAGATTACGACGGGCTGAAGGTGCTTCGGTTCTATGCGGTATACAGAGCAATGGTGCGAG CCAAGGTAACCTCGATACGCCTCCTGCAGGAAAACGATGCCCGCGATAAAACATTGACACATCAGGAGCATCTCTCGTTT ATCTCGCTCGCCGAAAACTACACAACACTCCGCAAACCGGTTCTGATACTGACCAGAGGAGTCTCGGGAAGCGGAAAAAC AACCCTCGCAGCCGAACTCTCCTCATTGATCCCCGCAGTTCACTGCCGCTCGGATGTCGAGCGCAAACGACTCTTTGGAC TGAGCGCAAATGAGAAAAGCCGGGATGAAGATAAAAAAACAATCTACGCTGAAGCTTCGACCCGCCAAACCTATGCCCGG CTGCTCAATATCGCAGAAACCTGCATCAACGAGCACTACAGTGTCATTGTTGATGCGACATTCATGACCGCAAACCAGAG AGAACCGTTTTTACGCATCGCCAGGGAAAAAAAGTGCCCCACTGTTATCCTTGAGTGCAGCGCCCCGCTGCAGACCCTTG AAAAACGGGTTATAAACCGACTCAGTAAAGCTTCCGATGCGTCAGAAGCCGGCATAGAGATCCTTTATCGGCAGATGGAA AAACAGGACAGCCTCTCCCTGCAGGAAGAAGCTGTTGCCATAAAAGTCAATACGACAAAAAAAAATGCAACCGAAAGTAC GCTCAGAATGATCCGGGAAAAAATTTCCTGA
Upstream 100 bases:
>100_bases GGCGTCAAGAAACCGACAGCAGAAGAGAATTCATCAATTTTTCATAGCTTTCAGAAAAGCACTTGTCAAAGCGCTCTAAA CGTTATCAACCAGATCATAG
Downstream 100 bases:
>100_bases TCATACCTCAATGCCAAAAACAGCTCGAGCTGCCATCCCCGCCAGAAAACTCAGCAATGCGACCCCGAAACTCAAGCCGA CCATTTCGAAAAACCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLFTALQNPGSYPHDVASVTVVETHISMVFLTGTYAYKVKKPVDLGFLDFSTLEKRKQFCLEELRLNRRLCPDLYLDVLP ITEDNGLITVGGKGNVLEYAVQMLEFDRTMELDLLLKEHRLTPAHIDMISAIVSGFHQALSPSPPGSPYATPALILQTVL NNFSRIETGNCSDDESERLEKLKVWTVRAHEQCSLLFEKRKREGLVRQCHGDMHSGNMVLRNGGICIFDCIEFNPELSVI DLFSEIAFFIMDLEHRCHPELAWRFLNAYLSATGDYDGLKVLRFYAVYRAMVRAKVTSIRLLQENDARDKTLTHQEHLSF ISLAENYTTLRKPVLILTRGVSGSGKTTLAAELSSLIPAVHCRSDVERKRLFGLSANEKSRDEDKKTIYAEASTRQTYAR LLNIAETCINEHYSVIVDATFMTANQREPFLRIAREKKCPTVILECSAPLQTLEKRVINRLSKASDASEAGIEILYRQME KQDSLSLQEEAVAIKVNTTKKNATESTLRMIREKIS
Sequences:
>Translated_516_residues MLFTALQNPGSYPHDVASVTVVETHISMVFLTGTYAYKVKKPVDLGFLDFSTLEKRKQFCLEELRLNRRLCPDLYLDVLP ITEDNGLITVGGKGNVLEYAVQMLEFDRTMELDLLLKEHRLTPAHIDMISAIVSGFHQALSPSPPGSPYATPALILQTVL NNFSRIETGNCSDDESERLEKLKVWTVRAHEQCSLLFEKRKREGLVRQCHGDMHSGNMVLRNGGICIFDCIEFNPELSVI DLFSEIAFFIMDLEHRCHPELAWRFLNAYLSATGDYDGLKVLRFYAVYRAMVRAKVTSIRLLQENDARDKTLTHQEHLSF ISLAENYTTLRKPVLILTRGVSGSGKTTLAAELSSLIPAVHCRSDVERKRLFGLSANEKSRDEDKKTIYAEASTRQTYAR LLNIAETCINEHYSVIVDATFMTANQREPFLRIAREKKCPTVILECSAPLQTLEKRVINRLSKASDASEAGIEILYRQME KQDSLSLQEEAVAIKVNTTKKNATESTLRMIREKIS >Mature_516_residues MLFTALQNPGSYPHDVASVTVVETHISMVFLTGTYAYKVKKPVDLGFLDFSTLEKRKQFCLEELRLNRRLCPDLYLDVLP ITEDNGLITVGGKGNVLEYAVQMLEFDRTMELDLLLKEHRLTPAHIDMISAIVSGFHQALSPSPPGSPYATPALILQTVL NNFSRIETGNCSDDESERLEKLKVWTVRAHEQCSLLFEKRKREGLVRQCHGDMHSGNMVLRNGGICIFDCIEFNPELSVI DLFSEIAFFIMDLEHRCHPELAWRFLNAYLSATGDYDGLKVLRFYAVYRAMVRAKVTSIRLLQENDARDKTLTHQEHLSF ISLAENYTTLRKPVLILTRGVSGSGKTTLAAELSSLIPAVHCRSDVERKRLFGLSANEKSRDEDKKTIYAEASTRQTYAR LLNIAETCINEHYSVIVDATFMTANQREPFLRIAREKKCPTVILECSAPLQTLEKRVINRLSKASDASEAGIEILYRQME KQDSLSLQEEAVAIKVNTTKKNATESTLRMIREKIS
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 58448; Mature: 58448
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTALQNPGSYPHDVASVTVVETHISMVFLTGTYAYKVKKPVDLGFLDFSTLEKRKQFC CEEEECCCCCCCCCCHHEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHH LEELRLNRRLCPDLYLDVLPITEDNGLITVGGKGNVLEYAVQMLEFDRTMELDLLLKEHR HHHHHHHHCCCCHHHEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHC LTPAHIDMISAIVSGFHQALSPSPPGSPYATPALILQTVLNNFSRIETGNCSDDESERLE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KLKVWTVRAHEQCSLLFEKRKREGLVRQCHGDMHSGNMVLRNGGICIFDCIEFNPELSVI HHHEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCHHH DLFSEIAFFIMDLEHRCHPELAWRFLNAYLSATGDYDGLKVLRFYAVYRAMVRAKVTSIR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE LLQENDARDKTLTHQEHLSFISLAENYTTLRKPVLILTRGVSGSGKTTLAAELSSLIPAV EEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHH HCRSDVERKRLFGLSANEKSRDEDKKTIYAEASTRQTYARLLNIAETCINEHYSVIVDAT HHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEE FMTANQREPFLRIAREKKCPTVILECSAPLQTLEKRVINRLSKASDASEAGIEILYRQME EEECCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KQDSLSLQEEAVAIKVNTTKKNATESTLRMIREKIS HHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLFTALQNPGSYPHDVASVTVVETHISMVFLTGTYAYKVKKPVDLGFLDFSTLEKRKQFC CEEEECCCCCCCCCCHHEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHH LEELRLNRRLCPDLYLDVLPITEDNGLITVGGKGNVLEYAVQMLEFDRTMELDLLLKEHR HHHHHHHHCCCCHHHEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHC LTPAHIDMISAIVSGFHQALSPSPPGSPYATPALILQTVLNNFSRIETGNCSDDESERLE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KLKVWTVRAHEQCSLLFEKRKREGLVRQCHGDMHSGNMVLRNGGICIFDCIEFNPELSVI HHHEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCHHH DLFSEIAFFIMDLEHRCHPELAWRFLNAYLSATGDYDGLKVLRFYAVYRAMVRAKVTSIR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE LLQENDARDKTLTHQEHLSFISLAENYTTLRKPVLILTRGVSGSGKTTLAAELSSLIPAV EEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHH HCRSDVERKRLFGLSANEKSRDEDKKTIYAEASTRQTYARLLNIAETCINEHYSVIVDAT HHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEE FMTANQREPFLRIAREKKCPTVILECSAPLQTLEKRVINRLSKASDASEAGIEILYRQME EEECCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KQDSLSLQEEAVAIKVNTTKKNATESTLRMIREKIS HHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]