| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213707
Identifier: 193213707
GI number: 193213707
Start: 2277166
End: 2277681
Strand: Direct
Name: 193213707
Synonym: Cpar_2074
Alternate gene names: NA
Gene position: 2277166-2277681 (Clockwise)
Preceding gene: 193213690
Following gene: 193213708
Centisome position: 99.47
GC content: 62.21
Gene sequence:
>516_bases ATGCCATCCAAGTACCGCGAAACCGTCATCGACGGCTACAACCTGATTCACAAACTCCGCGACATCGCGCCCGGCGAACC GATGGCCTCCATGCGGGAACGGCTTGAAGCGATGCTCACGCGCTACCGGCAGAAAAGCCGCCGCCACGTTACCGTGGTCT ATGACGGCGGTGGCGGGCCGAGGGCTCATTCGTCGCGCGGCAGCATCGAGGTCACCTACAGCGGTTCGCTCAAATCCGCT GACCGCTGGATCATCGACCATGCCCGCTCGCTGGAGCCTCGCCCCGGCATGATGCTGGTGGTCAGCTCCGATCGTGAAAT CCAGCGGCACGCCACCGCATGGGGCGCCCGCTGCATCGATTCCGAAACCTTTATCGAGGAGCTGGCGGCGATGGGCATCA CCACGAATGGTGATGGAGGTCCGTCCCGCAAGGCCGGAGAGCAAAGCACCAGTTCAGCCCCGCTGTCCGACAAAGAGGTG GACTACTGGCTCAGGATGTTCGACAGGAAAAAATGA
Upstream 100 bases:
>100_bases CCACTTTCCCCACTTTAAATGTAGGCAATCGAAAGTTTAAAAAAAATAGTACACTCAAGTCTGGAGAGGCAAAAAACAGT AATAAAGCAGAAACAGTGCG
Downstream 100 bases:
>100_bases GGCGCACAAACCGCCACCATTTCTTTTGACAATTTATTATACTTAATGGCACCTTGACCGTTTGTGCATGGCCGCGCCTT TGGCGAAACTGCGAGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPSKYRETVIDGYNLIHKLRDIAPGEPMASMRERLEAMLTRYRQKSRRHVTVVYDGGGGPRAHSSRGSIEVTYSGSLKSA DRWIIDHARSLEPRPGMMLVVSSDREIQRHATAWGARCIDSETFIEELAAMGITTNGDGGPSRKAGEQSTSSAPLSDKEV DYWLRMFDRKK
Sequences:
>Translated_171_residues MPSKYRETVIDGYNLIHKLRDIAPGEPMASMRERLEAMLTRYRQKSRRHVTVVYDGGGGPRAHSSRGSIEVTYSGSLKSA DRWIIDHARSLEPRPGMMLVVSSDREIQRHATAWGARCIDSETFIEELAAMGITTNGDGGPSRKAGEQSTSSAPLSDKEV DYWLRMFDRKK >Mature_170_residues PSKYRETVIDGYNLIHKLRDIAPGEPMASMRERLEAMLTRYRQKSRRHVTVVYDGGGGPRAHSSRGSIEVTYSGSLKSAD RWIIDHARSLEPRPGMMLVVSSDREIQRHATAWGARCIDSETFIEELAAMGITTNGDGGPSRKAGEQSTSSAPLSDKEVD YWLRMFDRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19200; Mature: 19069
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKYRETVIDGYNLIHKLRDIAPGEPMASMRERLEAMLTRYRQKSRRHVTVVYDGGGGP CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC RAHSSRGSIEVTYSGSLKSADRWIIDHARSLEPRPGMMLVVSSDREIQRHATAWGARCID CCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC SETFIEELAAMGITTNGDGGPSRKAGEQSTSSAPLSDKEVDYWLRMFDRKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PSKYRETVIDGYNLIHKLRDIAPGEPMASMRERLEAMLTRYRQKSRRHVTVVYDGGGGP CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC RAHSSRGSIEVTYSGSLKSADRWIIDHARSLEPRPGMMLVVSSDREIQRHATAWGARCID CCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC SETFIEELAAMGITTNGDGGPSRKAGEQSTSSAPLSDKEVDYWLRMFDRKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA