| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213212
Identifier: 193213212
GI number: 193213212
Start: 1714034
End: 1715344
Strand: Direct
Name: 193213212
Synonym: Cpar_1567
Alternate gene names: NA
Gene position: 1714034-1715344 (Clockwise)
Preceding gene: 193213211
Following gene: 193213214
Centisome position: 74.87
GC content: 63.08
Gene sequence:
>1311_bases ATGACCGACACCACCTCTCACGCAAAAATAGGCCCTATCGAACTGGCGGCGTCCGTCATGCCCCGCCATGCATGGACGTT CCTGTTCGCGTCGTTCTTTTCGATCGGCATGGTCACCTTTGTCTCCATCGGACAGGCCTATATTCTGAACGAGCATCTCG GCATTCCGGTCTCCGAGCAGGGCACTATCAGCGGTGATCTGGTCTTCTGGACGGAGATCGTGACGCTCTTGCTCTTCGGC CCGGCAGGAGCGATCATGGACCGCATCGGCAGGCGGCCGGTCTATGCCGTGGGATTCATCATTCTGGCCATCGCCTACCT CTACTACCCACTCGTGACCGACGTCTTCCAGCTCACCATCGCCCGCATGATCTACGCGGTCGGCGTGGTCGCCGTGACGA GCGGCTTGGCGACAGTGCTGGTCGATTACCCGAAGGAGCGGTCGCGCGGCAAGCTCATCGCGATTGTCGGATTCCTGAAC GGACTCGGCATCGTCATCCTGAACCAGTTCTTCGGCGGCCTGCCCAAGACGCTCGTGGCCGACGGCATGAGCGGCACCGA GGCCGGATTCTGGGCGCACGCTGCGGTCGCGGGCACGGCGGCGGTGACGGCTATCGTGCTCTTTTTCGGCCTCAAGGGCG GTACGCCGGTGCGGCACGAGGAGCGGTTGCCGGTCAAAGAGCTGCTCACCAGCGGCTTCCGCCACGCCCGCAATCCACGG ATTCTGCTCTCCTACGCAGCGGCCTTCGTGGCGCGCGGCGACCAGTCGATCATCGGCACCTTCGTGCCGCTCTGGGGCAT GACCACTGGCCTGGCGATGGGCCTCGAACCCGCCGAAGCGGTCAAAAAAGGCACCTTCATTTTCATCATTTCGCAGGCCG CCGCGCTGCTCTGGGCGCCAGTCATCGGCATCTTCATCGACCGCTGGAACCGCGTCACGGCGCTCACCCTCTGCATGGGG CTGGCCGCCATCGGCTACCTCTCGCTGGCGATGATCGGCAACCCGCTCGAAACGTACTCGCTCATCTTTTTCGTGCTGCT CGGCATCGGCCAGATCAGCGCCTTCCTCGGCTCGCAATCGCTCATCGGCCAGGAAGCGCCAAAGGAGGCGCGAGGCTCGG TGATCGGAGCCTTCAACATCAGCGGAGCCATCGGCATCCTCTTCATCACCACCACCGGAGGCCGCCTCTTCGACGGCATG AGCCCCAAAGCCCCCTTCATCATCGTCGGCGCGGTGAACCTGATTGTGATGCTGGGAGGATTGTGGCTGCGGGCAAGAGA GGCGAAGAAGGGTGGAGAAATTGCGGCATGA
Upstream 100 bases:
>100_bases AAGAACGAACACGCAAGTTTACCCTGAAAACGACGAATCACCGAAAATTGATTTATCTGAACACTACATCGTTAACCACA CCCACCGCACCTCCAGCCCA
Downstream 100 bases:
>100_bases CAGAAAAGGATTGTCTTGTCATGCTGAACGAAGTGAAGCATCCCACCTGAAAAGTTATGATTGAGAGTTGATTGCATTTT GTTGCAGCTTTTACTATTGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Ferric Reductase Domain-Containing Protein
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTDTTSHAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFG PAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTDVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAIVGFLN GLGIVILNQFFGGLPKTLVADGMSGTEAGFWAHAAVAGTAAVTAIVLFFGLKGGTPVRHEERLPVKELLTSGFRHARNPR ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGIFIDRWNRVTALTLCMG LAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGM SPKAPFIIVGAVNLIVMLGGLWLRAREAKKGGEIAA
Sequences:
>Translated_436_residues MTDTTSHAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFG PAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTDVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAIVGFLN GLGIVILNQFFGGLPKTLVADGMSGTEAGFWAHAAVAGTAAVTAIVLFFGLKGGTPVRHEERLPVKELLTSGFRHARNPR ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGIFIDRWNRVTALTLCMG LAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGM SPKAPFIIVGAVNLIVMLGGLWLRAREAKKGGEIAA >Mature_435_residues TDTTSHAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQGTISGDLVFWTEIVTLLLFGP AGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTDVFQLTIARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAIVGFLNG LGIVILNQFFGGLPKTLVADGMSGTEAGFWAHAAVAGTAAVTAIVLFFGLKGGTPVRHEERLPVKELLTSGFRHARNPRI LLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAPVIGIFIDRWNRVTALTLCMGL AAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQSLIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMS PKAPFIIVGAVNLIVMLGGLWLRAREAKKGGEIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46300; Mature: 46169
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTSHAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCC GTISGDLVFWTEIVTLLLFGPAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTDVFQLTI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAIVGFLNGLGIVILNQFFGGLPKTLVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHCCCCHHHHH DGMSGTEAGFWAHAAVAGTAAVTAIVLFFGLKGGTPVRHEERLPVKELLTSGFRHARNPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHHHHHH VIGIFIDRWNRVTALTLCMGLAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH LIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMSPKAPFIIVGAVNLIVMLGG HHCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCCEECCCCCCCCEEEEHHHHHHHHHHH LWLRAREAKKGGEIAA HHHHHHHHCCCCCCCC >Mature Secondary Structure TDTTSHAKIGPIELAASVMPRHAWTFLFASFFSIGMVTFVSIGQAYILNEHLGIPVSEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCC GTISGDLVFWTEIVTLLLFGPAGAIMDRIGRRPVYAVGFIILAIAYLYYPLVTDVFQLTI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARMIYAVGVVAVTSGLATVLVDYPKERSRGKLIAIVGFLNGLGIVILNQFFGGLPKTLVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHCCCCHHHHH DGMSGTEAGFWAHAAVAGTAAVTAIVLFFGLKGGTPVRHEERLPVKELLTSGFRHARNPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH ILLSYAAAFVARGDQSIIGTFVPLWGMTTGLAMGLEPAEAVKKGTFIFIISQAAALLWAP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHHHHHH VIGIFIDRWNRVTALTLCMGLAAIGYLSLAMIGNPLETYSLIFFVLLGIGQISAFLGSQS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH LIGQEAPKEARGSVIGAFNISGAIGILFITTTGGRLFDGMSPKAPFIIVGAVNLIVMLGG HHCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCCEECCCCCCCCEEEEHHHHHHHHHHH LWLRAREAKKGGEIAA HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA