Click here to switch to the map view.

The map label for this gene is 193213203

Identifier: 193213203

GI number: 193213203

Start: 1705414

End: 1705980

Strand: Direct

Name: 193213203

Synonym: Cpar_1558

Alternate gene names: NA

Gene position: 1705414-1705980 (Clockwise)

Preceding gene: 193213202

Following gene: 193213204

Centisome position: 74.5

GC content: 59.79

Gene sequence:

>567_bases
ATGAACGAAACCATCAGCACCATTCTCAGGCGGCGCAGCGTGCGCGCCTACCGTCCCGATCCGGTCGGTGAAGCTGAACT
CGACCTCATGCTCGAAGCTGCCCGCCATGCGCCCACCGCCATGAACCAGCAACCCTGGCACTTCACGGTCATCCGCAACC
GAGAACTCCTCGATGATCTTGAAGAGCACTGCATCACCGCATTCATCGAATCAAAGAACAGCGCCCTGAGAGAAGTCGCA
AAAATGGCCGGTTTCAGCGTCTTCTACCGCGCCCCGATGCTCGTGATCATCTCAGGTGACCCCGATGCCCTTGCCCCGCA
GAACGACTGCACGCTGGCGATGGAAAACATGATGATCGCCGCCACCTCGCTCGGCATCGGCAGTTGCTGGACCAACGCCG
TCATGATGTATTACGCCACCGACAAAGGCAAAGCTGCATTCGAAGAGCTCGGCGTCACCTTCCCCGAAGGCTACCAGCCC
TACGCCGCAGCCGCATTCGGCTACCCGGCGGAACCGTACCCGGAAACTCCGCCCAAAAAAGCCAACTGCGTCACCATCCT
GGACTGA

Upstream 100 bases:

>100_bases
AGGCAGCTTCGTTCTCTGCCGGATAACACGGCATTCCGGCACGTTGAAAAGCAATCGGGCAGGAATGCCGTGTTTCAGGA
TACCCAACAAGGAGACTGTC

Downstream 100 bases:

>100_bases
CAAAAACCGCCCGAGCAGGAAGCATCTGAAAAACCACCCGCTCCGCCTTGCAGGCTTCATGTGCCAGCTCTGCTTATGGC
CGCAATGCTGAAAAAGCATC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNETISTILRRRSVRAYRPDPVGEAELDLMLEAARHAPTAMNQQPWHFTVIRNRELLDDLEEHCITAFIESKNSALREVA
KMAGFSVFYRAPMLVIISGDPDALAPQNDCTLAMENMMIAATSLGIGSCWTNAVMMYYATDKGKAAFEELGVTFPEGYQP
YAAAAFGYPAEPYPETPPKKANCVTILD

Sequences:

>Translated_188_residues
MNETISTILRRRSVRAYRPDPVGEAELDLMLEAARHAPTAMNQQPWHFTVIRNRELLDDLEEHCITAFIESKNSALREVA
KMAGFSVFYRAPMLVIISGDPDALAPQNDCTLAMENMMIAATSLGIGSCWTNAVMMYYATDKGKAAFEELGVTFPEGYQP
YAAAAFGYPAEPYPETPPKKANCVTILD
>Mature_188_residues
MNETISTILRRRSVRAYRPDPVGEAELDLMLEAARHAPTAMNQQPWHFTVIRNRELLDDLEEHCITAFIESKNSALREVA
KMAGFSVFYRAPMLVIISGDPDALAPQNDCTLAMENMMIAATSLGIGSCWTNAVMMYYATDKGKAAFEELGVTFPEGYQP
YAAAAFGYPAEPYPETPPKKANCVTILD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20830; Mature: 20830

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETISTILRRRSVRAYRPDPVGEAELDLMLEAARHAPTAMNQQPWHFTVIRNRELLDDL
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHH
EEHCITAFIESKNSALREVAKMAGFSVFYRAPMLVIISGDPDALAPQNDCTLAMENMMIA
HHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCEEEEECCCCCCCCCCCCCEEHHHHEEEE
ATSLGIGSCWTNAVMMYYATDKGKAAFEELGVTFPEGYQPYAAAAFGYPAEPYPETPPKK
HHCCCCCHHHHCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
ANCVTILD
CCEEEEEC
>Mature Secondary Structure
MNETISTILRRRSVRAYRPDPVGEAELDLMLEAARHAPTAMNQQPWHFTVIRNRELLDDL
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHH
EEHCITAFIESKNSALREVAKMAGFSVFYRAPMLVIISGDPDALAPQNDCTLAMENMMIA
HHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCEEEEECCCCCCCCCCCCCEEHHHHEEEE
ATSLGIGSCWTNAVMMYYATDKGKAAFEELGVTFPEGYQPYAAAAFGYPAEPYPETPPKK
HHCCCCCHHHHCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
ANCVTILD
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]