| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212738
Identifier: 193212738
GI number: 193212738
Start: 1191323
End: 1192240
Strand: Direct
Name: 193212738
Synonym: Cpar_1083
Alternate gene names: NA
Gene position: 1191323-1192240 (Clockwise)
Preceding gene: 193212728
Following gene: 193212740
Centisome position: 52.04
GC content: 56.64
Gene sequence:
>918_bases ATGACATCAACCTCTCAGCAGCAGTCGAGAAGCGCCTTGATCGAGGCTGGCATTCGTTGCGCACTCTCCCCTATGGTGGA TGAGGATGACATCTGGAGCCGTTACAGCAACGACAAAACCGATATCGGCGAGCATCTGGCACGGGTCATCCGGACGCTGT CTGCGGCTGTGCCGCTGAACCGGAAGCTCAGGGCGCTCTCCATCGGCTCAAGCAGCGAACCGCAATTCCGGATCCTTGAG ACCGCCTTCCGGGGTGGACTTTACCTGCTTGACATCGATCCGAACGCGCTTGAGACGGTCAGGGATCGGGTGACACGGCA GAATATCGGCCATGTCAGCATGATTGCCGCCGACTACAACGAACAGCTTCATGAGGGGCAACGCACCAGGCAGTTCCTCG AACAATCGCTCGACAACCGTCCCGTCGATCTCATTACCCTGCACCATTCGCTCTACTATTGTGAAATGGAGCAGTGGGTG CCGCTGTTCAGAAATATCCACCAGCACCTCCTTGCGCGATCGGGTGCGATTCACGCCGTGCTTATGGCGCCATCGAGCCG TGATCCGCTTACCACGACCTCGCTCTATAGCCGTTTCGCGGGCAACTATTTCGGCATCTGCAACGACCAGAGCCTGCCGG AGCTGAAACGCCGCCTCGAACGCCTGCCGGAGTTCCGGAACACGCAGCTCCACCTCAGCACAAGCAAGGTGCGGTTTTAC GTCAATGATTTCGTCAAATTGATGAAAGTGGTCTGGATGATTCTGCTCTATCCGGGAGTGCACCAGTACAGCGACAGTCA GAAAAAACAGATCGCCTCGTATGTGTACGACACCTTTTACGCCGTACAACAGCCGCTGTATCAGGAGCAGCACCATCTGG TGCTCTATCGCGGCATCAGGTTTCGAGGACTCGGGTAA
Upstream 100 bases:
>100_bases AAGAGAAAAGAGGATCGTTATATTTCCTCTGAAGCAAAAACAAGGCAGGGACAGGTCTCCCCCAACCTGATCGGACCAGC CCCGGCAAAGGATAAGAGCC
Downstream 100 bases:
>100_bases TCTGAGGCTTGCCGGTCATGACCGATCAGGCAGGCGGCCTCTCCAGCATCGCAGTGATTCCTGTTCGATCATGATCGCGC AATAATTGCACATCGTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTSTSQQQSRSALIEAGIRCALSPMVDEDDIWSRYSNDKTDIGEHLARVIRTLSAAVPLNRKLRALSIGSSSEPQFRILE TAFRGGLYLLDIDPNALETVRDRVTRQNIGHVSMIAADYNEQLHEGQRTRQFLEQSLDNRPVDLITLHHSLYYCEMEQWV PLFRNIHQHLLARSGAIHAVLMAPSSRDPLTTTSLYSRFAGNYFGICNDQSLPELKRRLERLPEFRNTQLHLSTSKVRFY VNDFVKLMKVVWMILLYPGVHQYSDSQKKQIASYVYDTFYAVQQPLYQEQHHLVLYRGIRFRGLG
Sequences:
>Translated_305_residues MTSTSQQQSRSALIEAGIRCALSPMVDEDDIWSRYSNDKTDIGEHLARVIRTLSAAVPLNRKLRALSIGSSSEPQFRILE TAFRGGLYLLDIDPNALETVRDRVTRQNIGHVSMIAADYNEQLHEGQRTRQFLEQSLDNRPVDLITLHHSLYYCEMEQWV PLFRNIHQHLLARSGAIHAVLMAPSSRDPLTTTSLYSRFAGNYFGICNDQSLPELKRRLERLPEFRNTQLHLSTSKVRFY VNDFVKLMKVVWMILLYPGVHQYSDSQKKQIASYVYDTFYAVQQPLYQEQHHLVLYRGIRFRGLG >Mature_304_residues TSTSQQQSRSALIEAGIRCALSPMVDEDDIWSRYSNDKTDIGEHLARVIRTLSAAVPLNRKLRALSIGSSSEPQFRILET AFRGGLYLLDIDPNALETVRDRVTRQNIGHVSMIAADYNEQLHEGQRTRQFLEQSLDNRPVDLITLHHSLYYCEMEQWVP LFRNIHQHLLARSGAIHAVLMAPSSRDPLTTTSLYSRFAGNYFGICNDQSLPELKRRLERLPEFRNTQLHLSTSKVRFYV NDFVKLMKVVWMILLYPGVHQYSDSQKKQIASYVYDTFYAVQQPLYQEQHHLVLYRGIRFRGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35275; Mature: 35144
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSQQQSRSALIEAGIRCALSPMVDEDDIWSRYSNDKTDIGEHLARVIRTLSAAVPLN CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RKLRALSIGSSSEPQFRILETAFRGGLYLLDIDPNALETVRDRVTRQNIGHVSMIAADYN CCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHH EQLHEGQRTRQFLEQSLDNRPVDLITLHHSLYYCEMEQWVPLFRNIHQHLLARSGAIHAV HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LMAPSSRDPLTTTSLYSRFAGNYFGICNDQSLPELKRRLERLPEFRNTQLHLSTSKVRFY EECCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCHHHCCCEEEEEHHHHHHH VNDFVKLMKVVWMILLYPGVHQYSDSQKKQIASYVYDTFYAVQQPLYQEQHHLVLYRGIR HHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE FRGLG ECCCC >Mature Secondary Structure TSTSQQQSRSALIEAGIRCALSPMVDEDDIWSRYSNDKTDIGEHLARVIRTLSAAVPLN CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RKLRALSIGSSSEPQFRILETAFRGGLYLLDIDPNALETVRDRVTRQNIGHVSMIAADYN CCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHH EQLHEGQRTRQFLEQSLDNRPVDLITLHHSLYYCEMEQWVPLFRNIHQHLLARSGAIHAV HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LMAPSSRDPLTTTSLYSRFAGNYFGICNDQSLPELKRRLERLPEFRNTQLHLSTSKVRFY EECCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCHHHCCCEEEEEHHHHHHH VNDFVKLMKVVWMILLYPGVHQYSDSQKKQIASYVYDTFYAVQQPLYQEQHHLVLYRGIR HHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE FRGLG ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA