| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212709
Identifier: 193212709
GI number: 193212709
Start: 1163400
End: 1164329
Strand: Direct
Name: 193212709
Synonym: Cpar_1054
Alternate gene names: NA
Gene position: 1163400-1164329 (Clockwise)
Preceding gene: 193212708
Following gene: 193212710
Centisome position: 50.82
GC content: 51.83
Gene sequence:
>930_bases ATGGGTATGTCACTTCCTTCGAGCTGGCTCAGTATTGATGGCTCCGAACCACAGTACCATGAAGTTAAACTTCCCATATC CCGTCATACATGGCTTCCGTTTGCGGACGTCCCGCACTCTTACGATCATGTTGCCCTTTATAACGACCTGAAAAACGCAT ACCCCGAGGGTTTTGTCATCCGTGGGTGTCCTCCTGAGATCAGCCAACTCTTTCATGCATTGCGGCACGACACCTGCCGC ACAGGAGTCGATGCCGTCATCGACCTGTCCGACCGTTCCCACTTCGATGGGAAAAAGGTTCTGGCTGCACTCAAGCGCGG ATGGCGTCACGGATCGGTTGAAGAGATTCCTCTGAACAAAGATCACGCCGATCGGCTTCAGCTTCTCATATCCGAATCAT CGCATGCCGGAAAACCGCCATTGAAACATCTGTTCCGGAACGATCCTCTGAATGCCTCCAGATGCTTTGTTTTTCGCTCA TTTTCCGGGCACTGGCTGGCCTGCCTGACGCTGACCAGACAGACAGAAAATGCTTACCGTACTGAATTGATGATTCGCAA CCGACATGCTCCTGGAGACATCATGGAGTGTCTGATTGCCGATGCGGCAGAAATACTTCGATCAGAAGGCGCAGCCGAAT TAAGTCTGGGCGAAGTGCCGTTTATGCTTCATGAAGACGATAACAGGCCGTTAAGCATCATAGAACGATTGCTGTTTTCC GCAGCACCTTTGTTCAGGCACGCCTATGATTACCACGGGCTGTACCATTTCAAGAACAAGTTCCGTCCAGTCTGGCGCAC CATGCGGCTCTGCGCTGGACCCGGCGTCTGGTTGTCGCCATCTCTCCTCGTTGAACTTGCTCATTCGATGGGGTTTATCG ATTTACTGACTGACCGGACACTTTTTCACTGGCTTGAACCCTCCAGTTAA
Upstream 100 bases:
>100_bases TGTGAAACTTCACTGTGGAGTCCTAAGTTGTGCAATATAGAATCTGATTTGTGGAACTCGCTTCCAATAGATTTTCGATA GTAATTCTTATGCAGTAAAC
Downstream 100 bases:
>100_bases TTTCAACCAATCTCCAAGCTTCGGCATATCTCATCCCGCATAAATTCTTCAACAGATATTCTCTTCTCATTTTAGTTGCG TCACGAATATCGCTACACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGMSLPSSWLSIDGSEPQYHEVKLPISRHTWLPFADVPHSYDHVALYNDLKNAYPEGFVIRGCPPEISQLFHALRHDTCR TGVDAVIDLSDRSHFDGKKVLAALKRGWRHGSVEEIPLNKDHADRLQLLISESSHAGKPPLKHLFRNDPLNASRCFVFRS FSGHWLACLTLTRQTENAYRTELMIRNRHAPGDIMECLIADAAEILRSEGAAELSLGEVPFMLHEDDNRPLSIIERLLFS AAPLFRHAYDYHGLYHFKNKFRPVWRTMRLCAGPGVWLSPSLLVELAHSMGFIDLLTDRTLFHWLEPSS
Sequences:
>Translated_309_residues MGMSLPSSWLSIDGSEPQYHEVKLPISRHTWLPFADVPHSYDHVALYNDLKNAYPEGFVIRGCPPEISQLFHALRHDTCR TGVDAVIDLSDRSHFDGKKVLAALKRGWRHGSVEEIPLNKDHADRLQLLISESSHAGKPPLKHLFRNDPLNASRCFVFRS FSGHWLACLTLTRQTENAYRTELMIRNRHAPGDIMECLIADAAEILRSEGAAELSLGEVPFMLHEDDNRPLSIIERLLFS AAPLFRHAYDYHGLYHFKNKFRPVWRTMRLCAGPGVWLSPSLLVELAHSMGFIDLLTDRTLFHWLEPSS >Mature_308_residues GMSLPSSWLSIDGSEPQYHEVKLPISRHTWLPFADVPHSYDHVALYNDLKNAYPEGFVIRGCPPEISQLFHALRHDTCRT GVDAVIDLSDRSHFDGKKVLAALKRGWRHGSVEEIPLNKDHADRLQLLISESSHAGKPPLKHLFRNDPLNASRCFVFRSF SGHWLACLTLTRQTENAYRTELMIRNRHAPGDIMECLIADAAEILRSEGAAELSLGEVPFMLHEDDNRPLSIIERLLFSA APLFRHAYDYHGLYHFKNKFRPVWRTMRLCAGPGVWLSPSLLVELAHSMGFIDLLTDRTLFHWLEPSS
Specific function: Unknown
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35237; Mature: 35105
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMSLPSSWLSIDGSEPQYHEVKLPISRHTWLPFADVPHSYDHVALYNDLKNAYPEGFVI CCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE RGCPPEISQLFHALRHDTCRTGVDAVIDLSDRSHFDGKKVLAALKRGWRHGSVEEIPLNK ECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC DHADRLQLLISESSHAGKPPLKHLFRNDPLNASRCFVFRSFSGHWLACLTLTRQTENAYR CHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHH TELMIRNRHAPGDIMECLIADAAEILRSEGAAELSLGEVPFMLHEDDNRPLSIIERLLFS HHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHH AAPLFRHAYDYHGLYHFKNKFRPVWRTMRLCAGPGVWLSPSLLVELAHSMGFIDLLTDRT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHH LFHWLEPSS HHHHCCCCC >Mature Secondary Structure GMSLPSSWLSIDGSEPQYHEVKLPISRHTWLPFADVPHSYDHVALYNDLKNAYPEGFVI CCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE RGCPPEISQLFHALRHDTCRTGVDAVIDLSDRSHFDGKKVLAALKRGWRHGSVEEIPLNK ECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC DHADRLQLLISESSHAGKPPLKHLFRNDPLNASRCFVFRSFSGHWLACLTLTRQTENAYR CHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHH TELMIRNRHAPGDIMECLIADAAEILRSEGAAELSLGEVPFMLHEDDNRPLSIIERLLFS HHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHH AAPLFRHAYDYHGLYHFKNKFRPVWRTMRLCAGPGVWLSPSLLVELAHSMGFIDLLTDRT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHH LFHWLEPSS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA