| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212693
Identifier: 193212693
GI number: 193212693
Start: 1145225
End: 1146412
Strand: Direct
Name: 193212693
Synonym: Cpar_1038
Alternate gene names: NA
Gene position: 1145225-1146412 (Clockwise)
Preceding gene: 193212692
Following gene: 193212694
Centisome position: 50.03
GC content: 57.58
Gene sequence:
>1188_bases ATGCAATTGAAGAATAAATCGAGAACGGCCACAGCGCTGCTCGCCTCTGCGGCCATGCTGCTTCCGTCGGCCAAGAACGC TTGCGCCGATACGCCGCCTGAACAGGGCGTCGTGAGCATGAGGTACCTGAATTATCATGACTACCAGAAAGGTGATACTG ACCTGACGGCTGGCATGTCGCGCGACCGGATCGATGTCAATGCGCTTTCGTTTTACGGCATGATGCCGATCGCCGGGAAG TGGTCGATTGCGGGCACCTTTACCGAGGATTCGGTAAGCGGCGCATCACCGGCGTATCATGGAGCGGGCTTTCCGGCGGA CTCGATGTCAGGCGCCTCGGCAGAGATCCGTTACTCGGGCGATCTGAAGCTCACCCGCTACTTTTCGAGGGGCACGTTGA GTGTCGGCGGCAGCTATTCGGAGGAGTCCGATTACATCTCGCGCGGCTGCTCGCTGAACGGCACCTGGTCAACCGAAAGC AGGAACACCACTTTCAGCCTCGGAACGGCTTACAGCAGCGACACGATTTTTCTGAACAAGTCAACGGTGGTGGCTTCCAA GCAAAGCGATACGCCAGGCAGAAAACGAATCGTTTCGGGTCTGTTCGGCGTGACACAGGTCATGTCGCAAAACGACATTG TGCAGATGACCGCAACCTACGCACATGGCGACGGCTACTACAGCGACCCGTACAAAGACCCCGACGTGCGGCCCGGTAAG CGGAACATGTTCACCTTCCTGACCCGCTGGAACCACCATTTCGACGGACCGGACGGCACCGCGAGATTTTCGTACCGTTA TTACAACGACTCGTTCGGCATCGTGGCGCACACGTTCGATCTTGAATACGTGCAGCCGTTGCCGAACGGGTGGGAAATTA CACCGATGGTGCGATTCTATTCGCAAAGCGCGGCCGATTTCTATGTGCCTACCGGCGACGATCCGCTCGCCCCGACGCCG GTGCCTGCCGGAGCTGAACACTACTCCGAAGACCAGCGGTTATCAGCTTTCGGCGCTTTCAGTTACGGCGTGAAGGTCTC CAAAGAGCTGGGGCGAAGCTGGACTGCGGACGTGCAGTACGAAAACTATCAACAGCGTTACGACTGGTGCATCAACGACG ATGGCGATTCGGGCATCCCATCCTTCAGGTTCAGAAACATCCAGCTCGGATTGTCGCGCAAGCTGTGA
Upstream 100 bases:
>100_bases CCTTTGACCGGGATCGGCTTGAATCCGGCTATACCGAACATATTTACAGCAGCAAGGAGGCGGCATCCGGTGGGGCCGGA ATCGGCGGAGGCGGTTGCGG
Downstream 100 bases:
>100_bases TGCTTAAAAAACGTCTGCATTGATGTAATTTATTGTCCGTATGCAACGGTTTGAATTCAGGGCGATGGGCAGTGCGTGCG AGATTGTGCTCGCAGGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MQLKNKSRTATALLASAAMLLPSAKNACADTPPEQGVVSMRYLNYHDYQKGDTDLTAGMSRDRIDVNALSFYGMMPIAGK WSIAGTFTEDSVSGASPAYHGAGFPADSMSGASAEIRYSGDLKLTRYFSRGTLSVGGSYSEESDYISRGCSLNGTWSTES RNTTFSLGTAYSSDTIFLNKSTVVASKQSDTPGRKRIVSGLFGVTQVMSQNDIVQMTATYAHGDGYYSDPYKDPDVRPGK RNMFTFLTRWNHHFDGPDGTARFSYRYYNDSFGIVAHTFDLEYVQPLPNGWEITPMVRFYSQSAADFYVPTGDDPLAPTP VPAGAEHYSEDQRLSAFGAFSYGVKVSKELGRSWTADVQYENYQQRYDWCINDDGDSGIPSFRFRNIQLGLSRKL
Sequences:
>Translated_395_residues MQLKNKSRTATALLASAAMLLPSAKNACADTPPEQGVVSMRYLNYHDYQKGDTDLTAGMSRDRIDVNALSFYGMMPIAGK WSIAGTFTEDSVSGASPAYHGAGFPADSMSGASAEIRYSGDLKLTRYFSRGTLSVGGSYSEESDYISRGCSLNGTWSTES RNTTFSLGTAYSSDTIFLNKSTVVASKQSDTPGRKRIVSGLFGVTQVMSQNDIVQMTATYAHGDGYYSDPYKDPDVRPGK RNMFTFLTRWNHHFDGPDGTARFSYRYYNDSFGIVAHTFDLEYVQPLPNGWEITPMVRFYSQSAADFYVPTGDDPLAPTP VPAGAEHYSEDQRLSAFGAFSYGVKVSKELGRSWTADVQYENYQQRYDWCINDDGDSGIPSFRFRNIQLGLSRKL >Mature_395_residues MQLKNKSRTATALLASAAMLLPSAKNACADTPPEQGVVSMRYLNYHDYQKGDTDLTAGMSRDRIDVNALSFYGMMPIAGK WSIAGTFTEDSVSGASPAYHGAGFPADSMSGASAEIRYSGDLKLTRYFSRGTLSVGGSYSEESDYISRGCSLNGTWSTES RNTTFSLGTAYSSDTIFLNKSTVVASKQSDTPGRKRIVSGLFGVTQVMSQNDIVQMTATYAHGDGYYSDPYKDPDVRPGK RNMFTFLTRWNHHFDGPDGTARFSYRYYNDSFGIVAHTFDLEYVQPLPNGWEITPMVRFYSQSAADFYVPTGDDPLAPTP VPAGAEHYSEDQRLSAFGAFSYGVKVSKELGRSWTADVQYENYQQRYDWCINDDGDSGIPSFRFRNIQLGLSRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43664; Mature: 43664
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKNKSRTATALLASAAMLLPSAKNACADTPPEQGVVSMRYLNYHDYQKGDTDLTAGMS CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC RDRIDVNALSFYGMMPIAGKWSIAGTFTEDSVSGASPAYHGAGFPADSMSGASAEIRYSG CCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DLKLTRYFSRGTLSVGGSYSEESDYISRGCSLNGTWSTESRNTTFSLGTAYSSDTIFLNK CEEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC STVVASKQSDTPGRKRIVSGLFGVTQVMSQNDIVQMTATYAHGDGYYSDPYKDPDVRPGK CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC RNMFTFLTRWNHHFDGPDGTARFSYRYYNDSFGIVAHTFDLEYVQPLPNGWEITPMVRFY CHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEECCCCCCCEECHHHEEC SQSAADFYVPTGDDPLAPTPVPAGAEHYSEDQRLSAFGAFSYGVKVSKELGRSWTADVQY CCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHECCCEEEHHHHCCCEEECCCC ENYQQRYDWCINDDGDSGIPSFRFRNIQLGLSRKL CCHHHHCCEEECCCCCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MQLKNKSRTATALLASAAMLLPSAKNACADTPPEQGVVSMRYLNYHDYQKGDTDLTAGMS CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC RDRIDVNALSFYGMMPIAGKWSIAGTFTEDSVSGASPAYHGAGFPADSMSGASAEIRYSG CCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DLKLTRYFSRGTLSVGGSYSEESDYISRGCSLNGTWSTESRNTTFSLGTAYSSDTIFLNK CEEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC STVVASKQSDTPGRKRIVSGLFGVTQVMSQNDIVQMTATYAHGDGYYSDPYKDPDVRPGK CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC RNMFTFLTRWNHHFDGPDGTARFSYRYYNDSFGIVAHTFDLEYVQPLPNGWEITPMVRFY CHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEECCCCCCCEECHHHEEC SQSAADFYVPTGDDPLAPTPVPAGAEHYSEDQRLSAFGAFSYGVKVSKELGRSWTADVQY CCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHECCCEEEHHHHCCCEEECCCC ENYQQRYDWCINDDGDSGIPSFRFRNIQLGLSRKL CCHHHHCCEEECCCCCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA