| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is sphX [H]
Identifier: 193212577
GI number: 193212577
Start: 1007006
End: 1007821
Strand: Direct
Name: sphX [H]
Synonym: Cpar_0918
Alternate gene names: 193212577
Gene position: 1007006-1007821 (Clockwise)
Preceding gene: 193212576
Following gene: 193212578
Centisome position: 43.99
GC content: 55.88
Gene sequence:
>816_bases ATGAGAAGAACTGGAATGGTATTGTTGCTGCTGGGAATGCTGATCGCCTGGGGTGGAAGTCCTGAGGCGGTTGCCAAGGG AATCATGATCGACGGATCGACCACCGTCGGCCCGATTTCCAAATCTTTCGCGGCACTGTTTATGAAAAAGTACAAAGTGC CGGTGACGGTCAGCGAATCCGGCTCGGGCAATGGCGCCAAGAGCCTTATCAACGGCAGCTGCGATATTGCCGACATGTCC CGCTCGATGAAGCCGCAGGAGCTTGCGGCAGCTAAGGCCAAGGGCATCAACCCGGTTGCGCATGTGGCGGCTCTCGACGG CATCGCCATGGTTGTGCATCCTTCCAATCCCGTGCGTTCACTTACCAAAACGCAAATTGCCGATATCTATACCGGCAGGG TGACCAACTGGCGTCAGGTGGGCGGCCCCAACTTTCCGGTCGTGGTCATTCAGCGTGAATCCAACAGCGGTACCCAGGAG ACTTTCAGGGAGCTCGTGCTCGACAAGCGCAAGGTGGTTCGCAGCGCCGAAACGCAGGCCAGCAATGGCGCGGTCAAGAA TCGCGTCTCCCAGACGCGCGGAGCCATCGGCTTTCTTGGCCTCGGCTATGTGGATTCTTCCGTCAAGCCGATTGCGGTCA ACAAGGTGATGCCTTCGGTCGCAACGGTCAAAAACAACACCTATCCTCTTTCCCGTCCTTTGTTTATGTACACCAACGGC ACGCCTAAAGGGATGGTCGCCAAATTCATCGATCTGCCTAAAACGCCGGATGGTAAAAGGATTATCCGCGAGTTGGGTTT CGTTCCTAAATACTGA
Upstream 100 bases:
>100_bases AAGGGGCGCATTGGTTAAATTCCGGCACATTAAACGCCCTCGACGCATCGGTTGTGCCGGGAGCGGTTTTCAACGACGAG TTAACGAGATGGAGAATTGA
Downstream 100 bases:
>100_bases ATTTGGTTATCAATTCTTGCGTTCACTCTTCGCCGTGGCGGCAGGCTCCGTTTCACCGTGCGAGCCTGCTACCGGTTGAG CTGCTTTGAAGAGTGAATGT
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRRTGMVLLLLGMLIAWGGSPEAVAKGIMIDGSTTVGPISKSFAALFMKKYKVPVTVSESGSGNGAKSLINGSCDIADMS RSMKPQELAAAKAKGINPVAHVAALDGIAMVVHPSNPVRSLTKTQIADIYTGRVTNWRQVGGPNFPVVVIQRESNSGTQE TFRELVLDKRKVVRSAETQASNGAVKNRVSQTRGAIGFLGLGYVDSSVKPIAVNKVMPSVATVKNNTYPLSRPLFMYTNG TPKGMVAKFIDLPKTPDGKRIIRELGFVPKY
Sequences:
>Translated_271_residues MRRTGMVLLLLGMLIAWGGSPEAVAKGIMIDGSTTVGPISKSFAALFMKKYKVPVTVSESGSGNGAKSLINGSCDIADMS RSMKPQELAAAKAKGINPVAHVAALDGIAMVVHPSNPVRSLTKTQIADIYTGRVTNWRQVGGPNFPVVVIQRESNSGTQE TFRELVLDKRKVVRSAETQASNGAVKNRVSQTRGAIGFLGLGYVDSSVKPIAVNKVMPSVATVKNNTYPLSRPLFMYTNG TPKGMVAKFIDLPKTPDGKRIIRELGFVPKY >Mature_271_residues MRRTGMVLLLLGMLIAWGGSPEAVAKGIMIDGSTTVGPISKSFAALFMKKYKVPVTVSESGSGNGAKSLINGSCDIADMS RSMKPQELAAAKAKGINPVAHVAALDGIAMVVHPSNPVRSLTKTQIADIYTGRVTNWRQVGGPNFPVVVIQRESNSGTQE TFRELVLDKRKVVRSAETQASNGAVKNRVSQTRGAIGFLGLGYVDSSVKPIAVNKVMPSVATVKNNTYPLSRPLFMYTNG TPKGMVAKFIDLPKTPDGKRIIRELGFVPKY
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28977; Mature: 28977
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTGMVLLLLGMLIAWGGSPEAVAKGIMIDGSTTVGPISKSFAALFMKKYKVPVTVSES CCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECC GSGNGAKSLINGSCDIADMSRSMKPQELAAAKAKGINPVAHVAALDGIAMVVHPSNPVRS CCCCCHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCHHHH LTKTQIADIYTGRVTNWRQVGGPNFPVVVIQRESNSGTQETFRELVLDKRKVVRSAETQA HHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC SNGAVKNRVSQTRGAIGFLGLGYVDSSVKPIAVNKVMPSVATVKNNTYPLSRPLFMYTNG CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHCCCHHHHCCCCCCCCCCEEEEECC TPKGMVAKFIDLPKTPDGKRIIRELGFVPKY CCHHHHHHHHCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MRRTGMVLLLLGMLIAWGGSPEAVAKGIMIDGSTTVGPISKSFAALFMKKYKVPVTVSES CCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECC GSGNGAKSLINGSCDIADMSRSMKPQELAAAKAKGINPVAHVAALDGIAMVVHPSNPVRS CCCCCHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCHHHH LTKTQIADIYTGRVTNWRQVGGPNFPVVVIQRESNSGTQETFRELVLDKRKVVRSAETQA HHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC SNGAVKNRVSQTRGAIGFLGLGYVDSSVKPIAVNKVMPSVATVKNNTYPLSRPLFMYTNG CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHCCCHHHHCCCCCCCCCCEEEEECC TPKGMVAKFIDLPKTPDGKRIIRELGFVPKY CCHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]