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The map label for this gene is cyoC [H]

Identifier: 193212539

GI number: 193212539

Start: 962396

End: 963001

Strand: Direct

Name: cyoC [H]

Synonym: Cpar_0879

Alternate gene names: 193212539

Gene position: 962396-963001 (Clockwise)

Preceding gene: 193212538

Following gene: 193212540

Centisome position: 42.04

GC content: 50.99

Gene sequence:

>606_bases
ATGCAAAACAGTATGGATTCAACATATCTGGCAGAGTGGAAAGAACCCGACCGTCTCGACATGCAGATGCTCGGTTTCTG
GATTTACCTGATGAGTGATCTTGTGATTTTTGCGATCCTGTTCGCCACGTTTATTGTGCTGGGCCAGAACTACGCTGGTG
GCCCCGGTCCGAAACAGCTCTTTGACCTGCCCTATCTTTTTGGGGAAACAATGCTGCTCTTGACCAGCAGCGTTGCCTAC
GGATTCGGCATGGTGGCAATGCAAAAGGAAAAGAGACGCGCAGTATTGACCGGGCTGGTGGTCGCTTTTCTTTTGGGCGC
GGGATTCGTGGTGATGGAGATTCACGAATTTCATGGATTGATTATGGCTGGACACGGCCCGGCGAACAGCGGATTTTTAT
CATCCTTTTTTGCCCTCGTCGGCACACATGGCACGCACGTAAGTTTCGGCTTGCTGTGGATGGCCGTGATGATGATTCAG
GTGATGACAAAAGGATTTACCGCTGGAGTCCGCTCCCGCCTGATGCGCCTGAGTCTGTTCTGGCACTTTCTGGATATAGT
CTGGGTAGGCGTCTTTACCGTTGTTTACTTGTGGCAATTGCTCTAA

Upstream 100 bases:

>100_bases
GTGATCCCCGCGCACGAAGTGCAGCGCATCGAAGAGGAACGATTCCGGGCTTTGGCCGCAGCGCAAGATTCAGGGAATAG
TTGATAAAACGGAGCGTTCA

Downstream 100 bases:

>100_bases
TGATGTCATAAAACATTAAAACCGGAATCACAACAGTGGAACAGACTCATATCGAAAACACGGCTACCGAACACGTTTCG
TATAAAAACTACATTACCGG

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQNSMDSTYLAEWKEPDRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQLFDLPYLFGETMLLLTSSVAY
GFGMVAMQKEKRRAVLTGLVVAFLLGAGFVVMEIHEFHGLIMAGHGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQ
VMTKGFTAGVRSRLMRLSLFWHFLDIVWVGVFTVVYLWQLL

Sequences:

>Translated_201_residues
MQNSMDSTYLAEWKEPDRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQLFDLPYLFGETMLLLTSSVAY
GFGMVAMQKEKRRAVLTGLVVAFLLGAGFVVMEIHEFHGLIMAGHGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQ
VMTKGFTAGVRSRLMRLSLFWHFLDIVWVGVFTVVYLWQLL
>Mature_201_residues
MQNSMDSTYLAEWKEPDRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQLFDLPYLFGETMLLLTSSVAY
GFGMVAMQKEKRRAVLTGLVVAFLLGAGFVVMEIHEFHGLIMAGHGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQ
VMTKGFTAGVRSRLMRLSLFWHFLDIVWVGVFTVVYLWQLL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=191, Percent_Identity=54.4502617801047, Blast_Score=212, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22555; Mature: 22555

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNSMDSTYLAEWKEPDRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQL
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
FDLPYLFGETMLLLTSSVAYGFGMVAMQKEKRRAVLTGLVVAFLLGAGFVVMEIHEFHGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCE
IMAGHGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQVMTKGFTAGVRSRLMRLSLF
EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHFLDIVWVGVFTVVYLWQLL
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQNSMDSTYLAEWKEPDRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQL
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
FDLPYLFGETMLLLTSSVAYGFGMVAMQKEKRRAVLTGLVVAFLLGAGFVVMEIHEFHGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCE
IMAGHGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQVMTKGFTAGVRSRLMRLSLF
EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WHFLDIVWVGVFTVVYLWQLL
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]