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The map label for this gene is cyoA [H]

Identifier: 193212537

GI number: 193212537

Start: 959478

End: 960386

Strand: Direct

Name: cyoA [H]

Synonym: Cpar_0877

Alternate gene names: 193212537

Gene position: 959478-960386 (Clockwise)

Preceding gene: 193212535

Following gene: 193212538

Centisome position: 41.91

GC content: 53.47

Gene sequence:

>909_bases
ATGAGAAAAAATAATGCTTACGCCTTGTTCAAGGCATTCAGTCTATTTTTTACGTCATTTATCCTGACAGGGTGCAACAA
GATGGTGGTCTTTCAGCCAAAAGGCCCTGTCGCTCGCGATGAAGCCCTCCTTATCTACACGGCTTTCGGGCTGATGCTGA
TTGTCGTGATTCCGGTTCTGGTCATGGCAATCGGATTTGCCATCCGGTACAGAGCCTCTAACGACAAAGCCACCTACAAG
CCAAACTGGGCAAATTCCATCAAAGTCGAACTGATCGTCTGGCTGGTTCCCGTCATCATTGTCGCGTTTCTCTCCTGGCT
GACCTGGACTGGCACCTTCCGGCTCGATCCGTACAAGCCGATTGCCGCCGAAGCCAAACCGCTGCGGGTCGAGGTGGTAT
CGCTGGACTGGAACTGGCTTTTCATCTATCCCGATTACAACATCGCCACGGTCAACGAGCTTGTGCTTCCGGCCCATACG
CCGCTCAATTTCCGGCTCACCTCCGCGACGGTCATGACCTCGTTCTATGTTCCCCAGTTAGGAAGCCAGATGTACGCCAT
GGCCGGAATGCAGACGCAGTTACATCTCCTGGCGGATGAAACCGGCACTTTTGATGGGCACAACCGGGAGTTCAGTGGCA
AGGGGTATGCCACCATGCATTTCAAAACAATCGTAAAAACGCCGGAAGAATTTCAGGTTTGGGTGCAGAACGCTCGGCAA
ACCGCGAACGCCTTGAGCATGGCGGAATACAAAGCGCTGGCCGAACCCAACAGCAATCATCCTGTGACGGTTTACTCGCC
GGTTGTGCCCGGTTTGTTCGACCACATCGTCGGTCAATTTACCGGCTGGATGGGCGCGGATGGCGCGATGAAATCAATGA
CGCAACCCAACGGAAAGGCGCATGAATAA

Upstream 100 bases:

>100_bases
AAGGCGCGCTGGCAAGTCTTATGCAGAGCGCAAAACGACTGCCGCTATTTTTCAGCGTTCAGGATTATGCCCTGATTTAA
TAACTGGCGAAAGGGGGATA

Downstream 100 bases:

>100_bases
TATGCTTGGCAAACTATCGCTCTCCGACATACCGCTCAATGACGCCATCATCATGAACGCGGTTTATGGCTCTCTGGTGC
TGGCGGCTGTCATTATCGGA

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVLVMAIGFAIRYRASNDKATYK
PNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKPIAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHT
PLNFRLTSATVMTSFYVPQLGSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEEFQVWVQNARQ
TANALSMAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGKAHE

Sequences:

>Translated_302_residues
MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVLVMAIGFAIRYRASNDKATYK
PNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKPIAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHT
PLNFRLTSATVMTSFYVPQLGSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEEFQVWVQNARQ
TANALSMAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGKAHE
>Mature_302_residues
MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVLVMAIGFAIRYRASNDKATYK
PNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKPIAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHT
PLNFRLTSATVMTSFYVPQLGSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEEFQVWVQNARQ
TANALSMAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGKAHE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=295, Percent_Identity=50.5084745762712, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 33846; Mature: 33846

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVL
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHH
VMAIGFAIRYRASNDKATYKPNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKP
HHHHHHEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
IAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHTPLNFRLTSATVMTSFYVPQL
CCCCCCCEEEEEEEECCEEEEEECCCCEEEHHHEEECCCCCCEEEEEHHHHHHHHHHHHH
GSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEEFQVWVQNARQ
CCHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHH
TANALSMAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGKA
HHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
HE
CC
>Mature Secondary Structure
MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVL
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHH
VMAIGFAIRYRASNDKATYKPNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKP
HHHHHHEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
IAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHTPLNFRLTSATVMTSFYVPQL
CCCCCCCEEEEEEEECCEEEEEECCCCEEEHHHEEECCCCCCEEEEEHHHHHHHHHHHHH
GSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEEFQVWVQNARQ
CCHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHH
TANALSMAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGKA
HHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
HE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]