| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212452
Identifier: 193212452
GI number: 193212452
Start: 853371
End: 854372
Strand: Direct
Name: 193212452
Synonym: Cpar_0789
Alternate gene names: NA
Gene position: 853371-854372 (Clockwise)
Preceding gene: 193212451
Following gene: 193212454
Centisome position: 37.28
GC content: 41.22
Gene sequence:
>1002_bases ATGTCAGATATAATTAAGGTTCGTGTGGAACAACAGATTAATGAAATTGCAGATGAGGTTTCTGCAATTATAGCTGTTGT GAGGCCAATACTTTATGGATTATTACATGCTTTAAAGCGTGAGGTAGTTGAGGAGGTTAATGGTTATGCTAATGTGAAGC TTTTTATGCTTCCGCGATTGTACCGGCCGGGTGATGGTGATTGTGGTATATGTTTCGAATATGCGGTGCATGATGCCATT CGCCGAGGTGATGCGCCGATTCTTGAAAAGGTGAATGATAGTATGCGGAAATATTGTCGTGTTCCGGGTAATCAGACATC TTCGATATTATTTGGGGCTGAAAAGTCTGGAGCGATCCAATTGCTTGAGACTGCGGAAAATTTGCTGACAGACGAGTCTC GATTATTAACAGGGGCTCAGGCTCAACCAATTAAATTGCGTAGGTATATAAATATGTTGGCAGCTGCATTTAGAAAACCA ACAACACGTCCTTCACTTCCTTATAGTATTAGTGGCTTGTGGAAGGCTGATTTGTTTTTAGGCATGAGCGACTCGGATAG GTGGGTTGGGACAACGGTAAAAATAAACCCAAGACATCTTGAGGGGGCAAAAGGATTGCGTATTGCAATTATTCCTTCGC AGCAAGGAAGAGATGATAGAATAAGATTAGATTTTCAGAAAAATCTTGTAGTATGTCCTTTGCCCTATGATGGTGCATTT ATGGAGCTTTTTTACGTTGCGTGGGGGATTGTGCAGCAATTTTTGGCAGCAGATGCGAGAGTTCCAAGAGAAGTAAATCT ACCTATGGCATCTCATAGGATGGTGGCAAGACTTTTAGAAGATAGGAGGGAATATCCTCTCATCGAGATAATTGAATCAC TACAGCCTTTAGCGCAACCAGAATTGTTGAACAGTTATGAACAACAACCTCAAATAGACCTTTTTGGTGACGTTTCTCCA AATGTAAATACGGTTATAGCTCCGGTTTCTCGAGAAGTTTAA
Upstream 100 bases:
>100_bases AATAGAAACGAAGGCATTGAAATATGGTGTTGTGAGATGTATTTTATCCTTAAAAAAAAAGAGTTTTATTTTTCCAGAAA AACCTTTCTAAAGTAATGTT
Downstream 100 bases:
>100_bases TAATAAAAGCCTCAGTTTATAGTTGAGGCTTTTTCATTTTTCGAAATGCATGGATCGCATGACCTTCAAAAGGTCAGTGT TTAATGATTACTTACCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSDIIKVRVEQQINEIADEVSAIIAVVRPILYGLLHALKREVVEEVNGYANVKLFMLPRLYRPGDGDCGICFEYAVHDAI RRGDAPILEKVNDSMRKYCRVPGNQTSSILFGAEKSGAIQLLETAENLLTDESRLLTGAQAQPIKLRRYINMLAAAFRKP TTRPSLPYSISGLWKADLFLGMSDSDRWVGTTVKINPRHLEGAKGLRIAIIPSQQGRDDRIRLDFQKNLVVCPLPYDGAF MELFYVAWGIVQQFLAADARVPREVNLPMASHRMVARLLEDRREYPLIEIIESLQPLAQPELLNSYEQQPQIDLFGDVSP NVNTVIAPVSREV
Sequences:
>Translated_333_residues MSDIIKVRVEQQINEIADEVSAIIAVVRPILYGLLHALKREVVEEVNGYANVKLFMLPRLYRPGDGDCGICFEYAVHDAI RRGDAPILEKVNDSMRKYCRVPGNQTSSILFGAEKSGAIQLLETAENLLTDESRLLTGAQAQPIKLRRYINMLAAAFRKP TTRPSLPYSISGLWKADLFLGMSDSDRWVGTTVKINPRHLEGAKGLRIAIIPSQQGRDDRIRLDFQKNLVVCPLPYDGAF MELFYVAWGIVQQFLAADARVPREVNLPMASHRMVARLLEDRREYPLIEIIESLQPLAQPELLNSYEQQPQIDLFGDVSP NVNTVIAPVSREV >Mature_332_residues SDIIKVRVEQQINEIADEVSAIIAVVRPILYGLLHALKREVVEEVNGYANVKLFMLPRLYRPGDGDCGICFEYAVHDAIR RGDAPILEKVNDSMRKYCRVPGNQTSSILFGAEKSGAIQLLETAENLLTDESRLLTGAQAQPIKLRRYINMLAAAFRKPT TRPSLPYSISGLWKADLFLGMSDSDRWVGTTVKINPRHLEGAKGLRIAIIPSQQGRDDRIRLDFQKNLVVCPLPYDGAFM ELFYVAWGIVQQFLAADARVPREVNLPMASHRMVARLLEDRREYPLIEIIESLQPLAQPELLNSYEQQPQIDLFGDVSPN VNTVIAPVSREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37468; Mature: 37337
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIIKVRVEQQINEIADEVSAIIAVVRPILYGLLHALKREVVEEVNGYANVKLFMLPRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHH YRPGDGDCGICFEYAVHDAIRRGDAPILEKVNDSMRKYCRVPGNQTSSILFGAEKSGAIQ CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH LLETAENLLTDESRLLTGAQAQPIKLRRYINMLAAAFRKPTTRPSLPYSISGLWKADLFL HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEE GMSDSDRWVGTTVKINPRHLEGAKGLRIAIIPSQQGRDDRIRLDFQKNLVVCPLPYDGAF ECCCCCCEEEEEEEECCHHCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCHHH MELFYVAWGIVQQFLAADARVPREVNLPMASHRMVARLLEDRREYPLIEIIESLQPLAQP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH ELLNSYEQQPQIDLFGDVSPNVNTVIAPVSREV HHHHHHHCCCCEEEECCCCCCCCEEEECCCCCC >Mature Secondary Structure SDIIKVRVEQQINEIADEVSAIIAVVRPILYGLLHALKREVVEEVNGYANVKLFMLPRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHH YRPGDGDCGICFEYAVHDAIRRGDAPILEKVNDSMRKYCRVPGNQTSSILFGAEKSGAIQ CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH LLETAENLLTDESRLLTGAQAQPIKLRRYINMLAAAFRKPTTRPSLPYSISGLWKADLFL HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEE GMSDSDRWVGTTVKINPRHLEGAKGLRIAIIPSQQGRDDRIRLDFQKNLVVCPLPYDGAF ECCCCCCEEEEEEEECCHHCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCHHH MELFYVAWGIVQQFLAADARVPREVNLPMASHRMVARLLEDRREYPLIEIIESLQPLAQP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH ELLNSYEQQPQIDLFGDVSPNVNTVIAPVSREV HHHHHHHCCCCEEEECCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA