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The map label for this gene is csmI [H]

Identifier: 193212443

GI number: 193212443

Start: 843446

End: 844147

Strand: Direct

Name: csmI [H]

Synonym: Cpar_0780

Alternate gene names: 193212443

Gene position: 843446-844147 (Clockwise)

Preceding gene: 193212442

Following gene: 193212444

Centisome position: 36.84

GC content: 58.26

Gene sequence:

>702_bases
ATGAATCTCATCATTAACGACAAAACAGCTCAGGCGACCGTCGGCGAAACCGTCGGCAAGGCTGCCAGGCTGAATCATGC
CCATGTGGGTTATGTTTGTGGCGGCCACGGCCTTTGCCAGGCTTGCTACGTTACCGTTCAGGAGGGCGCAGACTGCCTCG
GCCCGCTGACCGATGTCGAAAAAGCGTTCCTTTCTCCGCGCCAGATCGCTGCCGGTGGTCGCATGGCCTGCCAGGCTACG
CTTGCCAAAGAGGGTACGGTGAAGGTGCTGTCCCGTCCGGAAGAGGTGCGCCGCATGGTGTTCAGCAACCCGTTCCAGCT
TATTGGATATGCCGCTGATATGGGCAAAGACACCGCGCAGCAGATCGTGCCGGGCGTCCAGAACTTCATTGGCCGCATAC
AGCGTGGTGAGATGGGCGGCAAGGAAGCGCTTGGCGATCTGATGGAGTCCGTGCAGGGCGCTGCAGGTCTGGTTGTCGAA
ACCGTTCAGCAGCTTCCGCAGAACCTTCCCATCCCGTTCAAGGATCAGATCATGGACGTGATCGGCAAACTGCCGCAGCT
TCCGGTTTCGCTTTCGCAGATCCAGTTGCCGATTTCACTGCCGCAGCTTCCGTTCCAGCTTCCTTTCCTGCCAGCCAAGA
AGGAATCGACTGAAGCGCTTGAAAAGGTGACGATCACTGTTCAGCCGAAGCCTAAAGCCTGA

Upstream 100 bases:

>100_bases
CCCTCATAACACCCCTTGCATCGAAGTACTTTTCTGCCGTCACGCTGTTTGGTGATGGCTATGCACGGGCATGGCATTCA
AACGATCAATCACTACACCA

Downstream 100 bases:

>100_bases
CCGTATTTACGGTTACATTCTTTTTTACTCCCCCGGTGATGAGCCGGGGGAGTTTGTTTTGTAGTGAAAAACCGCTGCCG
CTCAGCGTCCGATAACCAGT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNLIINDKTAQATVGETVGKAARLNHAHVGYVCGGHGLCQACYVTVQEGADCLGPLTDVEKAFLSPRQIAAGGRMACQAT
LAKEGTVKVLSRPEEVRRMVFSNPFQLIGYAADMGKDTAQQIVPGVQNFIGRIQRGEMGGKEALGDLMESVQGAAGLVVE
TVQQLPQNLPIPFKDQIMDVIGKLPQLPVSLSQIQLPISLPQLPFQLPFLPAKKESTEALEKVTITVQPKPKA

Sequences:

>Translated_233_residues
MNLIINDKTAQATVGETVGKAARLNHAHVGYVCGGHGLCQACYVTVQEGADCLGPLTDVEKAFLSPRQIAAGGRMACQAT
LAKEGTVKVLSRPEEVRRMVFSNPFQLIGYAADMGKDTAQQIVPGVQNFIGRIQRGEMGGKEALGDLMESVQGAAGLVVE
TVQQLPQNLPIPFKDQIMDVIGKLPQLPVSLSQIQLPISLPQLPFQLPFLPAKKESTEALEKVTITVQPKPKA
>Mature_233_residues
MNLIINDKTAQATVGETVGKAARLNHAHVGYVCGGHGLCQACYVTVQEGADCLGPLTDVEKAFLSPRQIAAGGRMACQAT
LAKEGTVKVLSRPEEVRRMVFSNPFQLIGYAADMGKDTAQQIVPGVQNFIGRIQRGEMGGKEALGDLMESVQGAAGLVVE
TVQQLPQNLPIPFKDQIMDVIGKLPQLPVSLSQIQLPISLPQLPFQLPFLPAKKESTEALEKVTITVQPKPKA

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 24937; Mature: 24937

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIINDKTAQATVGETVGKAARLNHAHVGYVCGGHGLCQACYVTVQEGADCLGPLTDVE
CCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHCCHHHHH
KAFLSPRQIAAGGRMACQATLAKEGTVKVLSRPEEVRRMVFSNPFQLIGYAADMGKDTAQ
HHHCCCHHHHCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH
QIVPGVQNFIGRIQRGEMGGKEALGDLMESVQGAAGLVVETVQQLPQNLPIPFKDQIMDV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGKLPQLPVSLSQIQLPISLPQLPFQLPFLPAKKESTEALEKVTITVQPKPKA
HHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure
MNLIINDKTAQATVGETVGKAARLNHAHVGYVCGGHGLCQACYVTVQEGADCLGPLTDVE
CCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHCCHHHHH
KAFLSPRQIAAGGRMACQATLAKEGTVKVLSRPEEVRRMVFSNPFQLIGYAADMGKDTAQ
HHHCCCHHHHCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH
QIVPGVQNFIGRIQRGEMGGKEALGDLMESVQGAAGLVVETVQQLPQNLPIPFKDQIMDV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGKLPQLPVSLSQIQLPISLPQLPFQLPFLPAKKESTEALEKVTITVQPKPKA
HHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]