| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is hflX [H]
Identifier: 193212441
GI number: 193212441
Start: 841460
End: 842812
Strand: Direct
Name: hflX [H]
Synonym: Cpar_0778
Alternate gene names: 193212441
Gene position: 841460-842812 (Clockwise)
Preceding gene: 193212438
Following gene: 193212442
Centisome position: 36.76
GC content: 59.2
Gene sequence:
>1353_bases GTGAATTACTATTACGAGAAGATCCATTTGATACCCATTCCATCCGCTGAACCGAGAGAGCGTGCTGTACTTGTCGGCAT TACCTCCTCGCCCGATATTCCGAGACATCTTGTCGAAGAGTACCTCGACGAACTGGCTTTTCTTGCCGATACGGCGGGAG CCGACGTCGTCAGTACCATCATTCAGGAAAAGAAGCAGCTCGATACAGCCACCTGTATCGGCAGCGGCAAAGCTGAAGAA CTGGCCGCGCTGGTCGAGACGGAGTCGATCGACATCGTCATTTTCGACGACGACCTCACGCCGGTGCAGGTGCGCAACCT CGAACGCATCCTCAAGTGCAAGGTGATCGACCGAACGGGTCTCATCCTGCAAATATTTGCCCTCCGAGCCAAATCCGCGC AGGCCCGCACGCAGGTGGAGCTGGCGCAGCTTGAATATCTCCTGCCACGGCTTTCCGGCGCGTGGACGCACCTCTCAAAG CAGAAGGGCGGCATCGGCACCAAAGGTCCTGGCGAAACGCAGATCGAGACCGACCGGCGACTGGTGCGCAATCGCATCGC TTCGCTCAAAAAGAAACTCCGCGCCGTCTCGCTTCAGCACGACACCCAGACCCGTGGTCGCACCACCGTGCCGCGCGTGG CGCTGGTAGGCTACACCAACGCGGGCAAATCGACGCTCATGAACGCGCTCTGCCCGGAAGCGGAGGCCTACGCCGAGAAC CGCCTGTTCGCGACGCTCGACACCAAAACCCGGCGGCTCGAACTCAGGATCAACAAGCTCGTGCTGCTCTCCGACACGGT CGGCTTCATCCGCAAGCTGCCGCATACGCTGGTCGAGAGTTTCAAATCCACGCTTGACGAGGTGTTGCAGGCCGACTTTC TCCTGCACGTCATCGACGTGAGCCATCCGGCTTTCGAGGAGCACATGCAGGTGGTGCGCGAGACGCTCAAGGAGATCGGA GTCAAGCACGACCACATCATCGAGGTGTTCAACAAGATCGACGCGCTCGAAGACCCGGCGGTGCTGACCGGCCTGCGCGG CAAGTATCCCGACGCGGTGTTCATCTCCGCCGCGCGCGGACTGAACCTCACGGTGCTGAAGGAAACTATCGCCAACTACG TCGCCCGCGACTACAAGCAGCGCAAGGTGCGCACGCACGTCTCGAACTACAAGCTGATCGGCTACCTCTACGACCACGCC GAGGTGATCGACAAAAAGCACGTCGATGAGGATGTGCTGCTCACCATCCGCGTGCACCGCAACAACCTCAAACAGATCGA CGCCATGCTCAAGGCGTCCGCATTGAAAAACCATGCCGCTGCAAATTTTCAACACCACGAAACGCACGATTGA
Upstream 100 bases:
>100_bases GGAATACGTTGTCATAACGTGACGGCAAAATAACCTAAAGGCTTTAATATAGCAAGAGCGCAGGAGGTGTCCGTCTTCGC ATGGTGCGAGCCTCCGTAGT
Downstream 100 bases:
>100_bases CGAAGCGCTCCTCGCCGAAGCCATCCAACTGGTGATCGGCGAAGAGGGTGGCAAGGTCGGTTCCATCGAAGCTATCTACT GCGGCAATAAAATGATCCGT
Product: GTP-binding proten HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MNYYYEKIHLIPIPSAEPRERAVLVGITSSPDIPRHLVEEYLDELAFLADTAGADVVSTIIQEKKQLDTATCIGSGKAEE LAALVETESIDIVIFDDDLTPVQVRNLERILKCKVIDRTGLILQIFALRAKSAQARTQVELAQLEYLLPRLSGAWTHLSK QKGGIGTKGPGETQIETDRRLVRNRIASLKKKLRAVSLQHDTQTRGRTTVPRVALVGYTNAGKSTLMNALCPEAEAYAEN RLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLVESFKSTLDEVLQADFLLHVIDVSHPAFEEHMQVVRETLKEIG VKHDHIIEVFNKIDALEDPAVLTGLRGKYPDAVFISAARGLNLTVLKETIANYVARDYKQRKVRTHVSNYKLIGYLYDHA EVIDKKHVDEDVLLTIRVHRNNLKQIDAMLKASALKNHAAANFQHHETHD
Sequences:
>Translated_450_residues MNYYYEKIHLIPIPSAEPRERAVLVGITSSPDIPRHLVEEYLDELAFLADTAGADVVSTIIQEKKQLDTATCIGSGKAEE LAALVETESIDIVIFDDDLTPVQVRNLERILKCKVIDRTGLILQIFALRAKSAQARTQVELAQLEYLLPRLSGAWTHLSK QKGGIGTKGPGETQIETDRRLVRNRIASLKKKLRAVSLQHDTQTRGRTTVPRVALVGYTNAGKSTLMNALCPEAEAYAEN RLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLVESFKSTLDEVLQADFLLHVIDVSHPAFEEHMQVVRETLKEIG VKHDHIIEVFNKIDALEDPAVLTGLRGKYPDAVFISAARGLNLTVLKETIANYVARDYKQRKVRTHVSNYKLIGYLYDHA EVIDKKHVDEDVLLTIRVHRNNLKQIDAMLKASALKNHAAANFQHHETHD >Mature_450_residues MNYYYEKIHLIPIPSAEPRERAVLVGITSSPDIPRHLVEEYLDELAFLADTAGADVVSTIIQEKKQLDTATCIGSGKAEE LAALVETESIDIVIFDDDLTPVQVRNLERILKCKVIDRTGLILQIFALRAKSAQARTQVELAQLEYLLPRLSGAWTHLSK QKGGIGTKGPGETQIETDRRLVRNRIASLKKKLRAVSLQHDTQTRGRTTVPRVALVGYTNAGKSTLMNALCPEAEAYAEN RLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLVESFKSTLDEVLQADFLLHVIDVSHPAFEEHMQVVRETLKEIG VKHDHIIEVFNKIDALEDPAVLTGLRGKYPDAVFISAARGLNLTVLKETIANYVARDYKQRKVRTHVSNYKLIGYLYDHA EVIDKKHVDEDVLLTIRVHRNNLKQIDAMLKASALKNHAAANFQHHETHD
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=269, Percent_Identity=33.8289962825279, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI310133118, Length=265, Percent_Identity=33.9622641509434, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI310124269, Length=261, Percent_Identity=34.0996168582375, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI310124267, Length=261, Percent_Identity=34.0996168582375, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI310124171, Length=261, Percent_Identity=34.0996168582375, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI310124169, Length=261, Percent_Identity=34.0996168582375, Blast_Score=126, Evalue=4e-29, Organism=Escherichia coli, GI1790615, Length=405, Percent_Identity=42.962962962963, Blast_Score=288, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17561038, Length=325, Percent_Identity=30.1538461538462, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24650079, Length=359, Percent_Identity=31.4763231197772, Blast_Score=126, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 50628; Mature: 50628
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYYYEKIHLIPIPSAEPRERAVLVGITSSPDIPRHLVEEYLDELAFLADTAGADVVSTI CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH IQEKKQLDTATCIGSGKAEELAALVETESIDIVIFDDDLTPVQVRNLERILKCKVIDRTG HHHHHHCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC LILQIFALRAKSAQARTQVELAQLEYLLPRLSGAWTHLSKQKGGIGTKGPGETQIETDRR HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHH LVRNRIASLKKKLRAVSLQHDTQTRGRTTVPRVALVGYTNAGKSTLMNALCPEAEAYAEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCC RLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLVESFKSTLDEVLQADFLLHVIDV CEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SHPAFEEHMQVVRETLKEIGVKHDHIIEVFNKIDALEDPAVLTGLRGKYPDAVFISAARG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCC LNLTVLKETIANYVARDYKQRKVRTHVSNYKLIGYLYDHAEVIDKKHVDEDVLLTIRVHR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCEEEEEEECC NNLKQIDAMLKASALKNHAAANFQHHETHD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNYYYEKIHLIPIPSAEPRERAVLVGITSSPDIPRHLVEEYLDELAFLADTAGADVVSTI CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH IQEKKQLDTATCIGSGKAEELAALVETESIDIVIFDDDLTPVQVRNLERILKCKVIDRTG HHHHHHCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC LILQIFALRAKSAQARTQVELAQLEYLLPRLSGAWTHLSKQKGGIGTKGPGETQIETDRR HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHH LVRNRIASLKKKLRAVSLQHDTQTRGRTTVPRVALVGYTNAGKSTLMNALCPEAEAYAEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCC RLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLVESFKSTLDEVLQADFLLHVIDV CEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SHPAFEEHMQVVRETLKEIGVKHDHIIEVFNKIDALEDPAVLTGLRGKYPDAVFISAARG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCC LNLTVLKETIANYVARDYKQRKVRTHVSNYKLIGYLYDHAEVIDKKHVDEDVLLTIRVHR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCEEEEEEECC NNLKQIDAMLKASALKNHAAANFQHHETHD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]