| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193212429
Identifier: 193212429
GI number: 193212429
Start: 824365
End: 825186
Strand: Direct
Name: 193212429
Synonym: Cpar_0765
Alternate gene names: NA
Gene position: 824365-825186 (Clockwise)
Preceding gene: 193212428
Following gene: 193212432
Centisome position: 36.01
GC content: 32.97
Gene sequence:
>822_bases ATGGTGAAAAAAAAGAAATATATCCATAGAATCCTTTTTTTGCAGCCTGCTCAACAGCTGGTTACTTGGATATTTTCAAC TTCAATTATTTGTGCTATTGTGATTGTCTTAGATCTTGGCGGTATAATTAAGGTAAAGATTCAAACATCAGTATTTGTAG AGTTTGCCTCGTTGATTGCAGGTATAAGCGGTACGGTAGGTGCAATAATGGTTGGTTTTATTATTTCTAAGCTTCAGTCG ATTGAGTCTGGTCGACAGTTATGGTACATAGAACTCAAGCATGAGTTAAAAGAGATGAGAGATGTTCTACATAGTTTAGT ATATGAATATTTTCAATTATGTGAGCCTTTAGATAAATGTATTCAATATCTTGAGAACTTAAACATTCGTACAGACCTTT TTGCGGTAAAATTAGATTGGGATACTATCCAAAAGCCATCCCGTCTTGCTTTTGGTGATGCCGATATTGATGTGAAGAAT AAAAATGTCTATTCATTAATTCAGTCTATAGTTCATGTTGAAGAATATATTGATGAATTGAGAATTAGCTGGGTTGCATC AAATGTGGTAGGGTCACTTTTAAGAGATTGTAGTAATAAATTATTTGCATTGCTGTTGCTTTCTTTGGGCTTCATGGCGT TTTTTGCGATTTCAGATGCTGAATATAGCTTTAATTCTTATTTGTTTTTGGTATTTATAGTGGCATTTTTGATGTATATT GGTATCGTGCTTGTTGAGATAATTATACATACTAATGATTTTGTGAGGAATGTTAATTCTTCAAATAACGGTAAAATGGA TGATTTGGAGTTGCGAGATTGA
Upstream 100 bases:
>100_bases AAGGTGACGGCTGAGGTTCGAAAAATTATCGGTAGAGTAAATGATTTTTTTTCGATGGAGAGTAAGTTTAACCTAAATCC TATTTCTTAGGTGTGCTTAG
Downstream 100 bases:
>100_bases TATACAAAATGCTGTAGTTTTCATTAAAACGCATTACAATATTTAGTTAGCTGCATTCTGAACCCACCCTCCCAAACAAC TCATACGCGGTCGAGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MVKKKKYIHRILFLQPAQQLVTWIFSTSIICAIVIVLDLGGIIKVKIQTSVFVEFASLIAGISGTVGAIMVGFIISKLQS IESGRQLWYIELKHELKEMRDVLHSLVYEYFQLCEPLDKCIQYLENLNIRTDLFAVKLDWDTIQKPSRLAFGDADIDVKN KNVYSLIQSIVHVEEYIDELRISWVASNVVGSLLRDCSNKLFALLLLSLGFMAFFAISDAEYSFNSYLFLVFIVAFLMYI GIVLVEIIIHTNDFVRNVNSSNNGKMDDLELRD
Sequences:
>Translated_273_residues MVKKKKYIHRILFLQPAQQLVTWIFSTSIICAIVIVLDLGGIIKVKIQTSVFVEFASLIAGISGTVGAIMVGFIISKLQS IESGRQLWYIELKHELKEMRDVLHSLVYEYFQLCEPLDKCIQYLENLNIRTDLFAVKLDWDTIQKPSRLAFGDADIDVKN KNVYSLIQSIVHVEEYIDELRISWVASNVVGSLLRDCSNKLFALLLLSLGFMAFFAISDAEYSFNSYLFLVFIVAFLMYI GIVLVEIIIHTNDFVRNVNSSNNGKMDDLELRD >Mature_273_residues MVKKKKYIHRILFLQPAQQLVTWIFSTSIICAIVIVLDLGGIIKVKIQTSVFVEFASLIAGISGTVGAIMVGFIISKLQS IESGRQLWYIELKHELKEMRDVLHSLVYEYFQLCEPLDKCIQYLENLNIRTDLFAVKLDWDTIQKPSRLAFGDADIDVKN KNVYSLIQSIVHVEEYIDELRISWVASNVVGSLLRDCSNKLFALLLLSLGFMAFFAISDAEYSFNSYLFLVFIVAFLMYI GIVLVEIIIHTNDFVRNVNSSNNGKMDDLELRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31193; Mature: 31193
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKKKYIHRILFLQPAQQLVTWIFSTSIICAIVIVLDLGGIIKVKIQTSVFVEFASLIA CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH GISGTVGAIMVGFIISKLQSIESGRQLWYIELKHELKEMRDVLHSLVYEYFQLCEPLDKC CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQYLENLNIRTDLFAVKLDWDTIQKPSRLAFGDADIDVKNKNVYSLIQSIVHVEEYIDEL HHHHHCCCCEEEEEEEEECHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH RISWVASNVVGSLLRDCSNKLFALLLLSLGFMAFFAISDAEYSFNSYLFLVFIVAFLMYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GIVLVEIIIHTNDFVRNVNSSNNGKMDDLELRD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKKKKYIHRILFLQPAQQLVTWIFSTSIICAIVIVLDLGGIIKVKIQTSVFVEFASLIA CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH GISGTVGAIMVGFIISKLQSIESGRQLWYIELKHELKEMRDVLHSLVYEYFQLCEPLDKC CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQYLENLNIRTDLFAVKLDWDTIQKPSRLAFGDADIDVKNKNVYSLIQSIVHVEEYIDEL HHHHHCCCCEEEEEEEEECHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH RISWVASNVVGSLLRDCSNKLFALLLLSLGFMAFFAISDAEYSFNSYLFLVFIVAFLMYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GIVLVEIIIHTNDFVRNVNSSNNGKMDDLELRD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA