| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is fchA [H]
Identifier: 193212354
GI number: 193212354
Start: 733435
End: 734058
Strand: Direct
Name: fchA [H]
Synonym: Cpar_0687
Alternate gene names: 193212354
Gene position: 733435-734058 (Clockwise)
Preceding gene: 193212353
Following gene: 193212357
Centisome position: 32.04
GC content: 61.54
Gene sequence:
>624_bases ATGAAGCCTGACGGTACGCTTGAATCGACCACCATTGCCGCCTACCTCGGTCGGCTCGCCAGCGGTGATCCCACGCCGGG TGGTGGGGCGGCAGCGGCAGTGACGGCCGCACAGGGCGTCGCTCTGCTCTCGATGGTCTGCAACCTGACACTCGGCAAGA AGAGGTTCGCCGACGTCGAGGATGAAGTTCAATCGATTCTCGAAACGTGTGAAACGGCCCGCCGCCAGATGCTCGTTCTC GGCGACCGAGACATGGAGGTGTTCGGCGCGATCATGGAGGTTTACAGGCTGCCGAAAACGACGCCCGAAGAGACCGAGGC TCGCAGTGCCGCCATCCAGGCTGCGCTGAAGGCCAGCTCCGAAGTGCCGTTCGAGCTTTTCAAGCGGTGCCAAGCTCTGC GGCCTCTTGCTGATCGCCTTGAACAGATCGGTAATCCCAACGTACTCAGCGATGTGATCGTCGGTCGCCACCTGCTGATT GCAGGCATGCTGAGCGCCAGGGCCAACGTCGAGGTTAACCTCGACGGCATTGATGATGCCGAGTTCTGTGAGGCGAAGCG TACGGTCATGCAGCAGGCGCTCGACGGGCTTGGCGAAAGCTGCCAAGGCTTGGTGGGGAGATAA
Upstream 100 bases:
>100_bases GATGCCAAGGAATCGGCCGGGCTCTACATTCCGAGGGTCGGCCCCATGACGGTGGCCATGTGCATGCGCAACGCCCTGCA ACTCTATCGCAACTACCATC
Downstream 100 bases:
>100_bases TCAGATCGGTCAGATCAGACGCATCCGACCGATCTGTCTGATTTTTCAAACACAAAAAAAAGCCGCCTTGAAAAAGGGCG GCTTTTTTGCGTTGATCCGG
Product: Formiminotransferase-cyclodeaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKPDGTLESTTIAAYLGRLASGDPTPGGGAAAAVTAAQGVALLSMVCNLTLGKKRFADVEDEVQSILETCETARRQMLVL GDRDMEVFGAIMEVYRLPKTTPEETEARSAAIQAALKASSEVPFELFKRCQALRPLADRLEQIGNPNVLSDVIVGRHLLI AGMLSARANVEVNLDGIDDAEFCEAKRTVMQQALDGLGESCQGLVGR
Sequences:
>Translated_207_residues MKPDGTLESTTIAAYLGRLASGDPTPGGGAAAAVTAAQGVALLSMVCNLTLGKKRFADVEDEVQSILETCETARRQMLVL GDRDMEVFGAIMEVYRLPKTTPEETEARSAAIQAALKASSEVPFELFKRCQALRPLADRLEQIGNPNVLSDVIVGRHLLI AGMLSARANVEVNLDGIDDAEFCEAKRTVMQQALDGLGESCQGLVGR >Mature_207_residues MKPDGTLESTTIAAYLGRLASGDPTPGGGAAAAVTAAQGVALLSMVCNLTLGKKRFADVEDEVQSILETCETARRQMLVL GDRDMEVFGAIMEVYRLPKTTPEETEARSAAIQAALKASSEVPFELFKRCQALRPLADRLEQIGNPNVLSDVIVGRHLLI AGMLSARANVEVNLDGIDDAEFCEAKRTVMQQALDGLGESCQGLVGR
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3404
COG function: function code E; Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=180, Percent_Identity=35.5555555555556, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI11140815, Length=180, Percent_Identity=35.5555555555556, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 22050; Mature: 22050
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDGTLESTTIAAYLGRLASGDPTPGGGAAAAVTAAQGVALLSMVCNLTLGKKRFADVE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHH DEVQSILETCETARRQMLVLGDRDMEVFGAIMEVYRLPKTTPEETEARSAAIQAALKASS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC EVPFELFKRCQALRPLADRLEQIGNPNVLSDVIVGRHLLIAGMLSARANVEVNLDGIDDA CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH EFCEAKRTVMQQALDGLGESCQGLVGR HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPDGTLESTTIAAYLGRLASGDPTPGGGAAAAVTAAQGVALLSMVCNLTLGKKRFADVE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHH DEVQSILETCETARRQMLVLGDRDMEVFGAIMEVYRLPKTTPEETEARSAAIQAALKASS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC EVPFELFKRCQALRPLADRLEQIGNPNVLSDVIVGRHLLIAGMLSARANVEVNLDGIDDA CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH EFCEAKRTVMQQALDGLGESCQGLVGR HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]