| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is ald [H]
Identifier: 193212344
GI number: 193212344
Start: 723253
End: 724356
Strand: Direct
Name: ald [H]
Synonym: Cpar_0677
Alternate gene names: 193212344
Gene position: 723253-724356 (Clockwise)
Preceding gene: 193212342
Following gene: 193212348
Centisome position: 31.59
GC content: 62.32
Gene sequence:
>1104_bases ATGAATATAGGAATTCCACGAGAGATCAAGACCCTTGAGTCGAGGGTCGCCTGCACGCCTGCGGGTGTTCGTTCGCTTGT CGGCGCTGGCCACCGGGTGCTGGTCGAGTGCGGTGCTGGCGAGGCGAGCGGCTTCAGCGACGACAAGTACCGGCTTGCCG GTGCGGTGCTTGTCCAGCAGCCGGAAGAGGCCTGGAGCGCCGATCTGATCGTCAAGGTCAAGGAACCGCTGGAGGAAGAG TTCCGGTTTTTCAGGAAAGAGCAGATTCTGTTCACTTTCCTGCATCTGGCTGGCGTTCCCGGATTGGCCAAAGCGCTTGC TGCTGCGGGCGTGACGGCGATCGGCTACGAAACTGTCGAGGTCGGCGGACGGTTGCCGCTGCTGGCTCCGATGAGCGAGA TTGCCGGCAAGATGAGCGTGCTGATGGGCGGCTACTATCTCTCGAAGCATCACGGTGGCATGGGGAAGCTGCTCGGCGGC GTGCCCGGCGTGCTCCCCGGCAGGGTGCTGGTGCTTGGCGGGGGAACTGCCGGGCTGAACGCCGCCCGCGCAGCAGCTGG TCTCGGGGCTGAAGTGACCGTCATGGAGGCCGATCAGGAGCGGATGCGCACGCTTGAATCGGTGTTGCCCTCCCAGGTGC ATACGATCTACTCGAACGAGCAGCATCTCGAAGAACTGCTGCCTGAAACCGACCTGCTCATTGGCGCGGTGCTGCTTGCC GGAGCCAGTGCTCCGAAGCTCGTTACCCGGCAGATGGTTCAGGCGATGAAGCCTGGCGCTGTGCTGGTCGATATTGCCAT TGATCAGGGAGGATGCATCGAGACATCGCGCCCGACCACCCATCACGATCCGGTGTTTGTGGAAGAGGGCGCAGTGCACT ACTGCGTCACCAACATGCCAGCGGCCTATCCCGCAACCTCGACCGAAGCGCTGACCGGCGTGACGCTGCCTTACGTCAGG AGGCTCGCCGACCTGGGACTTGAAAGCGCGATGGTGGTGATGCCTGGGCTTGCCGGTGGGCTGAATGTGTGGGATGGCAA AATTGTGCAGCCTGCCGTGGCCGCATCGCTTGGCGTCGAGTGTGGAAAGAATCCTTTTGTGTGA
Upstream 100 bases:
>100_bases TCTCGGAGCCCATTGCCATACGTTTTTTCTGTGATATTCCGGAAATGGAAGCCGGAGTACTACATTGTTACGAAGAGGAA AACTCTGATCATTTTCAGCC
Downstream 100 bases:
>100_bases AATAGCGATAAGTGTAGGGGCATCCCGACTTGTCGGGATGCCCACAAGTAACGTCGCTAAATTTTGTAGATCAGTTTCGT TGTTTTCTCAAGGCACCAGC
Product: alanine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNIGIPREIKTLESRVACTPAGVRSLVGAGHRVLVECGAGEASGFSDDKYRLAGAVLVQQPEEAWSADLIVKVKEPLEEE FRFFRKEQILFTFLHLAGVPGLAKALAAAGVTAIGYETVEVGGRLPLLAPMSEIAGKMSVLMGGYYLSKHHGGMGKLLGG VPGVLPGRVLVLGGGTAGLNAARAAAGLGAEVTVMEADQERMRTLESVLPSQVHTIYSNEQHLEELLPETDLLIGAVLLA GASAPKLVTRQMVQAMKPGAVLVDIAIDQGGCIETSRPTTHHDPVFVEEGAVHYCVTNMPAAYPATSTEALTGVTLPYVR RLADLGLESAMVVMPGLAGGLNVWDGKIVQPAVAASLGVECGKNPFV
Sequences:
>Translated_367_residues MNIGIPREIKTLESRVACTPAGVRSLVGAGHRVLVECGAGEASGFSDDKYRLAGAVLVQQPEEAWSADLIVKVKEPLEEE FRFFRKEQILFTFLHLAGVPGLAKALAAAGVTAIGYETVEVGGRLPLLAPMSEIAGKMSVLMGGYYLSKHHGGMGKLLGG VPGVLPGRVLVLGGGTAGLNAARAAAGLGAEVTVMEADQERMRTLESVLPSQVHTIYSNEQHLEELLPETDLLIGAVLLA GASAPKLVTRQMVQAMKPGAVLVDIAIDQGGCIETSRPTTHHDPVFVEEGAVHYCVTNMPAAYPATSTEALTGVTLPYVR RLADLGLESAMVVMPGLAGGLNVWDGKIVQPAVAASLGVECGKNPFV >Mature_367_residues MNIGIPREIKTLESRVACTPAGVRSLVGAGHRVLVECGAGEASGFSDDKYRLAGAVLVQQPEEAWSADLIVKVKEPLEEE FRFFRKEQILFTFLHLAGVPGLAKALAAAGVTAIGYETVEVGGRLPLLAPMSEIAGKMSVLMGGYYLSKHHGGMGKLLGG VPGVLPGRVLVLGGGTAGLNAARAAAGLGAEVTVMEADQERMRTLESVLPSQVHTIYSNEQHLEELLPETDLLIGAVLLA GASAPKLVTRQMVQAMKPGAVLVDIAIDQGGCIETSRPTTHHDPVFVEEGAVHYCVTNMPAAYPATSTEALTGVTLPYVR RLADLGLESAMVVMPGLAGGLNVWDGKIVQPAVAASLGVECGKNPFV
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=330, Percent_Identity=31.8181818181818, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI122939153, Length=330, Percent_Identity=31.8181818181818, Blast_Score=155, Evalue=7e-38, Organism=Escherichia coli, GI1787887, Length=346, Percent_Identity=32.0809248554913, Blast_Score=144, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17550456, Length=333, Percent_Identity=30.6306306306306, Blast_Score=139, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 38389; Mature: 38389
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGIPREIKTLESRVACTPAGVRSLVGAGHRVLVECGAGEASGFSDDKYRLAGAVLVQQ CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHEEEC PEEAWSADLIVKVKEPLEEEFRFFRKEQILFTFLHLAGVPGLAKALAAAGVTAIGYETVE CHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCEEEE VGGRLPLLAPMSEIAGKMSVLMGGYYLSKHHGGMGKLLGGVPGVLPGRVLVLGGGTAGLN CCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCCH AARAAAGLGAEVTVMEADQERMRTLESVLPSQVHTIYSNEQHLEELLPETDLLIGAVLLA HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH GASAPKLVTRQMVQAMKPGAVLVDIAIDQGGCIETSRPTTHHDPVFVEEGAVHYCVTNMP CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCC AAYPATSTEALTGVTLPYVRRLADLGLESAMVVMPGLAGGLNVWDGKIVQPAVAASLGVE CCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCC CGKNPFV CCCCCCC >Mature Secondary Structure MNIGIPREIKTLESRVACTPAGVRSLVGAGHRVLVECGAGEASGFSDDKYRLAGAVLVQQ CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHEEEC PEEAWSADLIVKVKEPLEEEFRFFRKEQILFTFLHLAGVPGLAKALAAAGVTAIGYETVE CHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCEEEE VGGRLPLLAPMSEIAGKMSVLMGGYYLSKHHGGMGKLLGGVPGVLPGRVLVLGGGTAGLN CCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCCH AARAAAGLGAEVTVMEADQERMRTLESVLPSQVHTIYSNEQHLEELLPETDLLIGAVLLA HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH GASAPKLVTRQMVQAMKPGAVLVDIAIDQGGCIETSRPTTHHDPVFVEEGAVHYCVTNMP CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCC AAYPATSTEALTGVTLPYVRRLADLGLESAMVVMPGLAGGLNVWDGKIVQPAVAASLGVE CCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCC CGKNPFV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2340274 [H]