| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193212221
Identifier: 193212221
GI number: 193212221
Start: 593247
End: 594095
Strand: Direct
Name: 193212221
Synonym: Cpar_0552
Alternate gene names: NA
Gene position: 593247-594095 (Clockwise)
Preceding gene: 193212220
Following gene: 193212222
Centisome position: 25.91
GC content: 56.54
Gene sequence:
>849_bases ATGGCTAATGGTTCGATTGTATCGTCTGGCCAATCCCTTCCGGAAGGGGGATGGTCGTGGCATGGTGGTAGCGGCGCTAT GATCTGGCAGCTGATGTTTGCTGACAGCGGGCTCCTTTTTGGCTTGAAGCGTTTTCCTGAACAACGCCGTGCTTCGCTGT TCTGCCTTGATTCGGAAACCGGCCGGATGCTGTGCGATGATTTCGTGCTCACCGGTGGTGCCGATTTTGCCGAACCTGTT GGTGACGGATGGATGATCGGTCTTGAAACCACCCACAGCAATCTGCTCTTTTGCCATGGTTTTCAGCCGGGAAGCCCGGA GCATCAGGGTATCTGGGCGGTCGATCTTGCCGAAGGTACTCTGGCCTGGGGCCGTCCGGACGTAGCTTTTGCGGCCAATC TTGGTGAGTCCGTTCTTGCCTATAAATCCCGCGTTTTCGCTGGTTTCCCCGAGCGGGATTACTTCCTGATCGATCCTCTT ACAGGCCGGGAGGTCGAGCACATTGGCACTGATCCTGAGCGCTTCAATGCTTTGCGCAACGAAGCCGTCGGCGAGGAGGA GCGGCAGGGGGTTGTGCTGCCTTCAGCAGGCATGGACGAATTCGGGCATCTTGAAACCATCAGGCTCGGTGGCTCAACCG TAACGGTGATGCATCGGCTGGTCAGTGGGGGGGGAACGGAAAACGCATGGAACTCGGTTCTTGCTCTTAATGCGGGCGAT CGTCTCCTTTTCGAGGATACGATGGGCCAGGCCGGAGCGGCGCCGCTGTTCAACAACTTTCTTGTCAGGGACCAGCGGCT CTATTACATCAAAGAGAGAGAAATGCTCGTCAGCATCGATCTCTCATGA
Upstream 100 bases:
>100_bases AGGAAAACGGGTTCAGGATTTCAGAAAAGCGCATGTATGATGTCGAGGGCGATCAGACGGTTGCCGTGACCATCTACAAG CTTGAGCGGGTAAAGGCATG
Downstream 100 bases:
>100_bases ACGTAACCTTTTCATGACCATAAACCGTTCAAGGCAGCCGGAAGATCACGAAGTGGCAAGGTGCCGGTGGCTTGAACCTT TTCTTTCTCATCTGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MANGSIVSSGQSLPEGGWSWHGGSGAMIWQLMFADSGLLFGLKRFPEQRRASLFCLDSETGRMLCDDFVLTGGADFAEPV GDGWMIGLETTHSNLLFCHGFQPGSPEHQGIWAVDLAEGTLAWGRPDVAFAANLGESVLAYKSRVFAGFPERDYFLIDPL TGREVEHIGTDPERFNALRNEAVGEEERQGVVLPSAGMDEFGHLETIRLGGSTVTVMHRLVSGGGTENAWNSVLALNAGD RLLFEDTMGQAGAAPLFNNFLVRDQRLYYIKEREMLVSIDLS
Sequences:
>Translated_282_residues MANGSIVSSGQSLPEGGWSWHGGSGAMIWQLMFADSGLLFGLKRFPEQRRASLFCLDSETGRMLCDDFVLTGGADFAEPV GDGWMIGLETTHSNLLFCHGFQPGSPEHQGIWAVDLAEGTLAWGRPDVAFAANLGESVLAYKSRVFAGFPERDYFLIDPL TGREVEHIGTDPERFNALRNEAVGEEERQGVVLPSAGMDEFGHLETIRLGGSTVTVMHRLVSGGGTENAWNSVLALNAGD RLLFEDTMGQAGAAPLFNNFLVRDQRLYYIKEREMLVSIDLS >Mature_281_residues ANGSIVSSGQSLPEGGWSWHGGSGAMIWQLMFADSGLLFGLKRFPEQRRASLFCLDSETGRMLCDDFVLTGGADFAEPVG DGWMIGLETTHSNLLFCHGFQPGSPEHQGIWAVDLAEGTLAWGRPDVAFAANLGESVLAYKSRVFAGFPERDYFLIDPLT GREVEHIGTDPERFNALRNEAVGEEERQGVVLPSAGMDEFGHLETIRLGGSTVTVMHRLVSGGGTENAWNSVLALNAGDR LLFEDTMGQAGAAPLFNNFLVRDQRLYYIKEREMLVSIDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30764; Mature: 30633
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGSIVSSGQSLPEGGWSWHGGSGAMIWQLMFADSGLLFGLKRFPEQRRASLFCLDSET CCCCCEEECCCCCCCCCCEEECCCCEEEEEEEECCCCHHHHHHHCCHHHCCEEEEEECCC GRMLCDDFVLTGGADFAEPVGDGWMIGLETTHSNLLFCHGFQPGSPEHQGIWAVDLAEGT CCEEECCEEEECCCCHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCE LAWGRPDVAFAANLGESVLAYKSRVFAGFPERDYFLIDPLTGREVEHIGTDPERFNALRN EECCCCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHH EAVGEEERQGVVLPSAGMDEFGHLETIRLGGSTVTVMHRLVSGGGTENAWNSVLALNAGD HHCCCHHHCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCC RLLFEDTMGQAGAAPLFNNFLVRDQRLYYIKEREMLVSIDLS EEEEECCCCCCCCCHHHHHHEECCCEEEEEEECEEEEEEECC >Mature Secondary Structure ANGSIVSSGQSLPEGGWSWHGGSGAMIWQLMFADSGLLFGLKRFPEQRRASLFCLDSET CCCCEEECCCCCCCCCCEEECCCCEEEEEEEECCCCHHHHHHHCCHHHCCEEEEEECCC GRMLCDDFVLTGGADFAEPVGDGWMIGLETTHSNLLFCHGFQPGSPEHQGIWAVDLAEGT CCEEECCEEEECCCCHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCE LAWGRPDVAFAANLGESVLAYKSRVFAGFPERDYFLIDPLTGREVEHIGTDPERFNALRN EECCCCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHH EAVGEEERQGVVLPSAGMDEFGHLETIRLGGSTVTVMHRLVSGGGTENAWNSVLALNAGD HHCCCHHHCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCC RLLFEDTMGQAGAAPLFNNFLVRDQRLYYIKEREMLVSIDLS EEEEECCCCCCCCCHHHHHHEECCCEEEEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA