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The map label for this gene is pscC

Identifier: 193212218

GI number: 193212218

Start: 591302

End: 591922

Strand: Direct

Name: pscC

Synonym: Cpar_0549

Alternate gene names: 193212218

Gene position: 591302-591922 (Clockwise)

Preceding gene: 193212216

Following gene: 193212220

Centisome position: 25.83

GC content: 50.72

Gene sequence:

>621_bases
ATGGACAACAAATCAAACGGTAAGCTTATTGCTTTGGCAATCGGCGGGGCTGTGTTAATGGGGACATTGTTTTTCTTGGT
ATCATTCCTGACCGGCTACTCTCCGGCGCCGAATCATTCGGCCATTCTCACTCCTCTGCGGTCGTTCATGGGATGGTTCC
TGCTTATCTTCTGTGCCTCTCTGATTATCATGGGTCTTGGCAAAATGTCCGGAGCTATCAGTGACAAGTGGTTCCTGAGC
TTCCCGCTAAGCATCTTCGTCATTGTCATGGTGATGTTCTTCAGCCTCAGGTTTTACTGGGAAAAAGGTCGTACCACCAC
TGTTGATGGCAAGTACATCCGTTCGGTTGAGCAGCTTAATGACTTCCTCAACAAGCCGGCCGCTACCAGCGATCTTCCTC
CGGTCCCGGCTGATTTCGATTTCGCAGCAGCTGAAAAGCTGACTGATGCAAAGTGCAACAAGTGCCACACGCTCGGTTCG
GTTGCCGATCTGTTCCGTACCAAGTACAAGAAGACCGGTCAGGTCAAGCTCATCGTCAAACGTATGCAGGGCTTCCCCGG
AGCCAACATTTCTGACGACGAGGTTATTGAAATCGGCACCTGGCTTCAGGAGAAATTCTGA

Upstream 100 bases:

>100_bases
TTAACGCTTTTTAGATGCAAATGTTTGCCCCCTTTGACAATTATGTTTATCTTTCTCAATAAATTTATGCAAGCGGCTAA
CACCTAATCCATTACTTGTT

Downstream 100 bases:

>100_bases
TTCTTCTGCCGGACAGTCGTCCGAACCCTTATTCAGAACAGCAGCGCCCCGGAAATCCGGGGCGTTCTGTATTGTGGGGG
TTTACTTCTCGGCGGTATAG

Product: photosystem P840 reaction center cytochrome c-551

Products: NA

Alternate protein names: Cytochrome c551

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDNKSNGKLIALAIGGAVLMGTLFFLVSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLIIMGLGKMSGAISDKWFLS
FPLSIFVIVMVMFFSLRFYWEKGRTTTVDGKYIRSVEQLNDFLNKPAATSDLPPVPADFDFAAAEKLTDAKCNKCHTLGS
VADLFRTKYKKTGQVKLIVKRMQGFPGANISDDEVIEIGTWLQEKF

Sequences:

>Translated_206_residues
MDNKSNGKLIALAIGGAVLMGTLFFLVSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLIIMGLGKMSGAISDKWFLS
FPLSIFVIVMVMFFSLRFYWEKGRTTTVDGKYIRSVEQLNDFLNKPAATSDLPPVPADFDFAAAEKLTDAKCNKCHTLGS
VADLFRTKYKKTGQVKLIVKRMQGFPGANISDDEVIEIGTWLQEKF
>Mature_206_residues
MDNKSNGKLIALAIGGAVLMGTLFFLVSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLIIMGLGKMSGAISDKWFLS
FPLSIFVIVMVMFFSLRFYWEKGRTTTVDGKYIRSVEQLNDFLNKPAATSDLPPVPADFDFAAAEKLTDAKCNKCHTLGS
VADLFRTKYKKTGQVKLIVKRMQGFPGANISDDEVIEIGTWLQEKF

Specific function: Monoheme cytochrome which is the immediate electron donor to P840 of the photosynthetic reaction center complex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CY551_CHLP8 (B3QM18)

Other databases:

- EMBL:   M95751
- EMBL:   CP001099
- PIR:   A45079
- RefSeq:   YP_001998171.1
- GeneID:   6419463
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0549
- HOGENOM:   HBG405706
- OMA:   CNKCHTL
- ProtClustDB:   CLSK637867
- GO:   GO:0015979
- GO:   GO:0006810
- InterPro:   IPR016203
- InterPro:   IPR009056
- InterPro:   IPR019604
- PIRSF:   PIRSF000009

Pfam domain/function: PF10643 Cytochrome-c551; SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 22858; Mature: 22858

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51007 CYTC

Important sites: BINDING 152-152 BINDING 155-155

Signals:

None

Transmembrane regions:

HASH(0x1999b3b8)-; HASH(0x1b703598)-; HASH(0x1a42a618)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKSNGKLIALAIGGAVLMGTLFFLVSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCAS
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LIIMGLGKMSGAISDKWFLSFPLSIFVIVMVMFFSLRFYWEKGRTTTVDGKYIRSVEQLN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
DFLNKPAATSDLPPVPADFDFAAAEKLTDAKCNKCHTLGSVADLFRTKYKKTGQVKLIVK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RMQGFPGANISDDEVIEIGTWLQEKF
HHCCCCCCCCCCCHHHHHHHHHHHCH
>Mature Secondary Structure
MDNKSNGKLIALAIGGAVLMGTLFFLVSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCAS
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LIIMGLGKMSGAISDKWFLSFPLSIFVIVMVMFFSLRFYWEKGRTTTVDGKYIRSVEQLN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
DFLNKPAATSDLPPVPADFDFAAAEKLTDAKCNKCHTLGSVADLFRTKYKKTGQVKLIVK
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RMQGFPGANISDDEVIEIGTWLQEKF
HHCCCCCCCCCCCHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383218