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The map label for this gene is yebC [C]

Identifier: 193212194

GI number: 193212194

Start: 565136

End: 565891

Strand: Direct

Name: yebC [C]

Synonym: Cpar_0525

Alternate gene names: 193212194

Gene position: 565136-565891 (Clockwise)

Preceding gene: 193212187

Following gene: 193212195

Centisome position: 24.69

GC content: 58.73

Gene sequence:

>756_bases
ATGTCAGGACACAGTAAATGGGCGACCATCAAGCGCAAAAAGGCCGCCACCGATCAGAAGAGAGGAAATCTGTTCACCAA
GCTCGTCAAGGAGATCACCATCGCAGCCAAAATGGGCGGCGGCGATCCGTCGGGCAACCCGCGTCTGAGGCTCGCCATCG
ATACGGCACGTGCCAACTCGATGCCGATGGACAACATCCAGCGCGCCATCAAGAAGGGTACCGGTGAACTGGAAGGCGCG
ACCTATGAAGAGATTACCTACGAAGGCTACGGCCCCGGCGGTATCGCGATCATCATCGAGACTGCGACCGACAACCGCAA
CCGCACCGTGGCCGACATCCGCCACCTGATGAGTCGCAGCGGCGGATCGCTCGGCGAGAACGGCAGCGTCGGCTGGATGT
TCAATCGCAAGGGTTCCATCGAGGTGCCAAAGTCGGCTATCTCCGAGGACGACCTGATGGAACTGCTGCTTGACGCAGGC
CTCGAAGAGCTGGAGAGCGACGACGAACAGTACTACACGGTGCTGACCGACGTGAAGGATCTGGAGCCGGTCAAGAAGGC
GCTCGAAGAGGCGGAGATTCCGTTCGAGAATGCCAAGATGGACATGATTCCGGACAACTACGTCGAGCTCGATGTCGAGG
ATGCCCGCAAGGCGCTCAAGCTGATCGATGCGCTCGAAAACAGCGACGACGCCCAGGCTGTGTACAGCAACATGGACATC
AGCGAAAGCGTCATGAGCGCGCTTGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
TTTATTTTTGACCCCGCAGGATTTGCTTTTCCTAAAGTAAAACAAATCTTTTCATAACCGCGTCATTTCCGGAATACTAT
CAATCATCGGCTCGTAATCT

Downstream 100 bases:

>100_bases
ATGGACACCTCTAAAAACTTGTTGCGCGATCCGATTGCTGCGTTATGTGGTGCTCGAAATCCTCACGTACTATCTGTACG
CTCCGGTTTCTGCGCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPSGNPRLRLAIDTARANSMPMDNIQRAIKKGTGELEGA
TYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRSGGSLGENGSVGWMFNRKGSIEVPKSAISEDDLMELLLDAG
LEELESDDEQYYTVLTDVKDLEPVKKALEEAEIPFENAKMDMIPDNYVELDVEDARKALKLIDALENSDDAQAVYSNMDI
SESVMSALEEE

Sequences:

>Translated_251_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPSGNPRLRLAIDTARANSMPMDNIQRAIKKGTGELEGA
TYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRSGGSLGENGSVGWMFNRKGSIEVPKSAISEDDLMELLLDAG
LEELESDDEQYYTVLTDVKDLEPVKKALEEAEIPFENAKMDMIPDNYVELDVEDARKALKLIDALENSDDAQAVYSNMDI
SESVMSALEEE
>Mature_250_residues
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPSGNPRLRLAIDTARANSMPMDNIQRAIKKGTGELEGAT
YEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRSGGSLGENGSVGWMFNRKGSIEVPKSAISEDDLMELLLDAGL
EELESDDEQYYTVLTDVKDLEPVKKALEEAEIPFENAKMDMIPDNYVELDVEDARKALKLIDALENSDDAQAVYSNMDIS
ESVMSALEEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=30.9236947791165, Blast_Score=129, Evalue=2e-30,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.9838709677419, Blast_Score=240, Evalue=6e-65,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=37.0212765957447, Blast_Score=135, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=23.3606557377049, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=33.8345864661654, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.4193548387097, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27580; Mature: 27449

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPSGNPRLRLAIDTARANS
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKKGTGELEGATYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRS
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGSLGENGSVGWMFNRKGSIEVPKSAISEDDLMELLLDAGLEELESDDEQYYTVLTDVKD
CCCCCCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHCHHH
LEPVKKALEEAEIPFENAKMDMIPDNYVELDVEDARKALKLIDALENSDDAQAVYSNMDI
HHHHHHHHHHHCCCCCCCEECCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
SESVMSALEEE
HHHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPSGNPRLRLAIDTARANS
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKKGTGELEGATYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRS
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGSLGENGSVGWMFNRKGSIEVPKSAISEDDLMELLLDAGLEELESDDEQYYTVLTDVKD
CCCCCCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHCHHH
LEPVKKALEEAEIPFENAKMDMIPDNYVELDVEDARKALKLIDALENSDDAQAVYSNMDI
HHHHHHHHHHHCCCCCCCEECCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
SESVMSALEEE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]