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The map label for this gene is lemA [H]

Identifier: 193212085

GI number: 193212085

Start: 449761

End: 450360

Strand: Direct

Name: lemA [H]

Synonym: Cpar_0415

Alternate gene names: 193212085

Gene position: 449761-450360 (Clockwise)

Preceding gene: 193212083

Following gene: 193212086

Centisome position: 19.65

GC content: 58.33

Gene sequence:

>600_bases
ATGATCCGATCATATTTTCGCTCTGTTTCCAGAGTTTTGCCTTTTCTGGTGGCCCTTGTCATGCTCAGCGGGTGTGGCTA
CAATGTCATGCAGCAGAATGAAGAGGCGGTGAACCGCGCATGGGGCGATCTTGAATCGCAGCTCCAGCGGCGCGCCGATC
TGGTGCCGAACCTCGTGGCCACGGTGAAGGGTGCGGCCAATTTCGAGAAGGAGACGCTTCAGGCGGTGGTCGAAGCCCGC
GCCAAAGCGACCTCTGTACAGCTTACGCCCGAGATGCTGAGCGACCAGGCGGCCATGTCGAAGTTCCAGGCGGCGCAGGG
CCAGCTCTCTTCGGCACTATCGCGATTGCTGGTGACCGTCGAGCGTTATCCCGAACTGAAGGCTACCCAGAATTTCAGGG
ATTTGCAGGTACAGCTCGAAGGCACCGAAAACCGCATCAGCGTGGCGCGTCAGCGCTATAACCAGGCGGTTCAGGTGTTC
AACTTCTCGATCCGCAAGTTTCCCAATTCTCTCACCAACAGCGTGGCGCTCAAGCTGAAGCCCAAGGAGTATTTCAAGGC
TGACGAGGCCGCCAGGGCGGTGCCGGAGGTGAAATTCTGA

Upstream 100 bases:

>100_bases
ATATTACCTGAAAAATTCGCTGCTTCGATTTTGCGGCGGGGCATCGATTATTATATTTTCATGAACAATGCCTGAACTAT
CAATCACGAAACGAACAGCT

Downstream 100 bases:

>100_bases
GCTTGCCGGTCAGACATAATCGCTCCGCTTTTCGATGGCTGCTGGCACCGCTTCTTGTGCTGGCAGCCTTGCTTTCAGCC
GTGCCGCTTCTGGCCGATTT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIRSYFRSVSRVLPFLVALVMLSGCGYNVMQQNEEAVNRAWGDLESQLQRRADLVPNLVATVKGAANFEKETLQAVVEAR
AKATSVQLTPEMLSDQAAMSKFQAAQGQLSSALSRLLVTVERYPELKATQNFRDLQVQLEGTENRISVARQRYNQAVQVF
NFSIRKFPNSLTNSVALKLKPKEYFKADEAARAVPEVKF

Sequences:

>Translated_199_residues
MIRSYFRSVSRVLPFLVALVMLSGCGYNVMQQNEEAVNRAWGDLESQLQRRADLVPNLVATVKGAANFEKETLQAVVEAR
AKATSVQLTPEMLSDQAAMSKFQAAQGQLSSALSRLLVTVERYPELKATQNFRDLQVQLEGTENRISVARQRYNQAVQVF
NFSIRKFPNSLTNSVALKLKPKEYFKADEAARAVPEVKF
>Mature_199_residues
MIRSYFRSVSRVLPFLVALVMLSGCGYNVMQQNEEAVNRAWGDLESQLQRRADLVPNLVATVKGAANFEKETLQAVVEAR
AKATSVQLTPEMLSDQAAMSKFQAAQGQLSSALSRLLVTVERYPELKATQNFRDLQVQLEGTENRISVARQRYNQAVQVF
NFSIRKFPNSLTNSVALKLKPKEYFKADEAARAVPEVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22333; Mature: 22333

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSYFRSVSRVLPFLVALVMLSGCGYNVMQQNEEAVNRAWGDLESQLQRRADLVPNLVA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKGAANFEKETLQAVVEARAKATSVQLTPEMLSDQAAMSKFQAAQGQLSSALSRLLVTV
HHHHHCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYPELKATQNFRDLQVQLEGTENRISVARQRYNQAVQVFNFSIRKFPNSLTNSVALKLK
HHCCCCHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEC
PKEYFKADEAARAVPEVKF
CHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRSYFRSVSRVLPFLVALVMLSGCGYNVMQQNEEAVNRAWGDLESQLQRRADLVPNLVA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKGAANFEKETLQAVVEARAKATSVQLTPEMLSDQAAMSKFQAAQGQLSSALSRLLVTV
HHHHHCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYPELKATQNFRDLQVQLEGTENRISVARQRYNQAVQVFNFSIRKFPNSLTNSVALKLK
HHCCCCHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEC
PKEYFKADEAARAVPEVKF
CHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]