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The map label for this gene is 193212067

Identifier: 193212067

GI number: 193212067

Start: 423365

End: 423697

Strand: Direct

Name: 193212067

Synonym: Cpar_0397

Alternate gene names: NA

Gene position: 423365-423697 (Clockwise)

Preceding gene: 193212065

Following gene: 193212068

Centisome position: 18.49

GC content: 49.85

Gene sequence:

>333_bases
ATGATTTTTCCTTGTGAAAAAGCTGTTTGGTACTATCTGCCGCAGATCAGGGCGGATCTGGCCAAAGAGCTGGTTAAAAC
CGGTATGACCCAGTCAAGCGCGGCAAAAGTGCTCGGAGTGACGCCGGCGGCAGTTTCCCAGTATCTGCACAAAAAGCGCG
GCGGTCAGACCGTCAAGTCACGCGATTACAAGCAGGAAATCAAGAAAGCTGTGGACAGGATTCGTGAAGGCGCATCGGGC
ACCGACCTGTATGGTATCGTGTGCCGGTGTTGTCAGATTTTGAAAAAAGATGATACGGAAATTGGTACGAATTGTGGCGA
TATAGTGCTTTAA

Upstream 100 bases:

>100_bases
TCATAATTTAATGCAAAAGAGCCCTTTAATTCGAGGCGCCTGCCAAGTGGAGTTTCTGCCAGAAGCGAAGAGCGACCTTG
TTCAACTGAATGCATGATCG

Downstream 100 bases:

>100_bases
GTGTATGATGGAAAAAGAGATAACCGGCTCTGCCGGTTCTGAACCAGCGGCCGGGTTCAAGGAGTCGGCTGTTTTTACCC
TCACGGCCATTCTTGCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator Fis Family; Transcriptional Regulator XRE Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcriptional Regulator-Like; Transcriptional Regulator Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIFPCEKAVWYYLPQIRADLAKELVKTGMTQSSAAKVLGVTPAAVSQYLHKKRGGQTVKSRDYKQEIKKAVDRIREGASG
TDLYGIVCRCCQILKKDDTEIGTNCGDIVL

Sequences:

>Translated_110_residues
MIFPCEKAVWYYLPQIRADLAKELVKTGMTQSSAAKVLGVTPAAVSQYLHKKRGGQTVKSRDYKQEIKKAVDRIREGASG
TDLYGIVCRCCQILKKDDTEIGTNCGDIVL
>Mature_110_residues
MIFPCEKAVWYYLPQIRADLAKELVKTGMTQSSAAKVLGVTPAAVSQYLHKKRGGQTVKSRDYKQEIKKAVDRIREGASG
TDLYGIVCRCCQILKKDDTEIGTNCGDIVL

Specific function: Unknown

COG id: COG2522

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12182; Mature: 12182

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPCEKAVWYYLPQIRADLAKELVKTGMTQSSAAKVLGVTPAAVSQYLHKKRGGQTVKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
RDYKQEIKKAVDRIREGASGTDLYGIVCRCCQILKKDDTEIGTNCGDIVL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFPCEKAVWYYLPQIRADLAKELVKTGMTQSSAAKVLGVTPAAVSQYLHKKRGGQTVKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
RDYKQEIKKAVDRIREGASGTDLYGIVCRCCQILKKDDTEIGTNCGDIVL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA