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The map label for this gene is ygdH [C]

Identifier: 193212065

GI number: 193212065

Start: 421809

End: 422546

Strand: Direct

Name: ygdH [C]

Synonym: Cpar_0395

Alternate gene names: 193212065

Gene position: 421809-422546 (Clockwise)

Preceding gene: 193212064

Following gene: 193212067

Centisome position: 18.43

GC content: 56.1

Gene sequence:

>738_bases
ATGGGAGAGCCAAAGAAACGCAAACCGGAGTGGGCTGTCAGGGCTGCTGAAACCCCCGTGCCGCAAGCGCCGCTGCTTGC
CGGAAGCGAGTTCATGGCCGATGGCTGGCGCGTGTTCAAGATCATGGCCGAATTCGTCAACGGCTTTGAAATGATGTCGA
ATACGGGGCCAGCCGTTACGGTGTTCGGTTCGACCAGGGTCAAAGAGGGCGACGCCGAATATCAGCTTGCCGAAACAATG
GGTCGGATGCTCGTCGAGTCGGGTTTCGGCGTCATTACCGGCGGTGGGCCGGGCGCAATGGAGGGGGCCAACAAAGGGGC
GCAGCAGCATGGCGGGGCATCAATCGGTTTCAACATCAAGCTGCCGAACCAGCAGCACCCCAACCCCTACGTCGATTACG
ACAAGCTGGTGACCTTCGAGTACTTCTTCGTGCGCAAAGTCATGTTCCTCAAATACTCCCAGGCTTTCATCGTGCTGCCC
GGTGGCTTTGGCACGCTCGACGAATTTTCCGAAGCGATCACGCTCATCCAGACCGGCAAGAGCCAGAAATTTCCGGTGAT
TATGATGGGCAGCGACTATTGGGGCGACCTGTACCGCTGGTTCAAAACGCGGATGCTTGAGGAGAAAGGGTTTATCAGCG
AAAAAGACCTCGATTTCATCTTCCTTGAAGACGATCCCGACAAGGTGATTGAGATCATTCACAGCTTCTATCCCGAAGGG
TACTCGGTCAACTTCTGA

Upstream 100 bases:

>100_bases
CAGCGAACTCGGGTTGCATGGCGTGCAGTTCCATCCCGAATCGATCATGACCTCTGTCGGCCACGATCTCATCAAAAATT
TCTTGGACATCTGATTTGTC

Downstream 100 bases:

>100_bases
GTTCAGCATTTCCGAAATATCGCATCAGGCAGCATTTCCACTGCTGTTGGGGTGATCTCTTGCGATTGCCCGTTTACAAA
TGTTTGGTGTCGAGACGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGEPKKRKPEWAVRAAETPVPQAPLLAGSEFMADGWRVFKIMAEFVNGFEMMSNTGPAVTVFGSTRVKEGDAEYQLAETM
GRMLVESGFGVITGGGPGAMEGANKGAQQHGGASIGFNIKLPNQQHPNPYVDYDKLVTFEYFFVRKVMFLKYSQAFIVLP
GGFGTLDEFSEAITLIQTGKSQKFPVIMMGSDYWGDLYRWFKTRMLEEKGFISEKDLDFIFLEDDPDKVIEIIHSFYPEG
YSVNF

Sequences:

>Translated_245_residues
MGEPKKRKPEWAVRAAETPVPQAPLLAGSEFMADGWRVFKIMAEFVNGFEMMSNTGPAVTVFGSTRVKEGDAEYQLAETM
GRMLVESGFGVITGGGPGAMEGANKGAQQHGGASIGFNIKLPNQQHPNPYVDYDKLVTFEYFFVRKVMFLKYSQAFIVLP
GGFGTLDEFSEAITLIQTGKSQKFPVIMMGSDYWGDLYRWFKTRMLEEKGFISEKDLDFIFLEDDPDKVIEIIHSFYPEG
YSVNF
>Mature_244_residues
GEPKKRKPEWAVRAAETPVPQAPLLAGSEFMADGWRVFKIMAEFVNGFEMMSNTGPAVTVFGSTRVKEGDAEYQLAETMG
RMLVESGFGVITGGGPGAMEGANKGAQQHGGASIGFNIKLPNQQHPNPYVDYDKLVTFEYFFVRKVMFLKYSQAFIVLPG
GFGTLDEFSEAITLIQTGKSQKFPVIMMGSDYWGDLYRWFKTRMLEEKGFISEKDLDFIFLEDDPDKVIEIIHSFYPEGY
SVNF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27459; Mature: 27328

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEPKKRKPEWAVRAAETPVPQAPLLAGSEFMADGWRVFKIMAEFVNGFEMMSNTGPAVT
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VFGSTRVKEGDAEYQLAETMGRMLVESGFGVITGGGPGAMEGANKGAQQHGGASIGFNIK
EECCCEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCEEEEEEE
LPNQQHPNPYVDYDKLVTFEYFFVRKVMFLKYSQAFIVLPGGFGTLDEFSEAITLIQTGK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCHHHHHHHHHHHHCCC
SQKFPVIMMGSDYWGDLYRWFKTRMLEEKGFISEKDLDFIFLEDDPDKVIEIIHSFYPEG
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC
YSVNF
EEECC
>Mature Secondary Structure 
GEPKKRKPEWAVRAAETPVPQAPLLAGSEFMADGWRVFKIMAEFVNGFEMMSNTGPAVT
CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VFGSTRVKEGDAEYQLAETMGRMLVESGFGVITGGGPGAMEGANKGAQQHGGASIGFNIK
EECCCEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCEEEEEEE
LPNQQHPNPYVDYDKLVTFEYFFVRKVMFLKYSQAFIVLPGGFGTLDEFSEAITLIQTGK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCHHHHHHHHHHHHCCC
SQKFPVIMMGSDYWGDLYRWFKTRMLEEKGFISEKDLDFIFLEDDPDKVIEIIHSFYPEG
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC
YSVNF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA