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The map label for this gene is tnpX [C]

Identifier: 193212063

GI number: 193212063

Start: 419440

End: 420867

Strand: Direct

Name: tnpX [C]

Synonym: Cpar_0393

Alternate gene names: 193212063

Gene position: 419440-420867 (Clockwise)

Preceding gene: 193212062

Following gene: 193212064

Centisome position: 18.32

GC content: 33.75

Gene sequence:

>1428_bases
ATGAAGCTAAGTCAAATATACAACTTAGGGAAATCGCAAGCAGAATTGGATTTTGTTGATATAGATCCAAGCGAAGATTT
GCCTCTGTTTCTTGACCCATTTTTTCTAAGTATAAAAAAAGATAATTGGTCTCACGAGGCGACCTTAACACTTAGAAGCT
TCTTTCAACAAGTTATTGACTTAATTAGAGTCAATGATGAGGATGGCGCAAAAGCTTTATTCGACCATCTTCATGAGCCG
AATGTTACATGTTTAGGTATGTCGGTTGGTGATCCAAGAGGTAGAGGTGTGGGGAATCAAGATACGGATAAGATTTATGA
AAGCTTGCTTCGTAGCCGAGCAATTCAAACAGGGCTTATTAGAGATATTGAGGACAATATTTTGTTTGTTGATAATTTTG
GAAAAGATAAGTTGTCAGATATGACAACAAATATAATAACTAAGCATCTTATTGAGTATACCCAAAATCAATGTAGATTG
AATAATATTCCTTTGTTGGATGGTATAAATTCTGGGTTTTACTGGGATAGATATGAGGGTGAATGGGTTTCAAGTCATTC
GCAGATGTTAGTTTATGGCGATAAGAAGCTGTTGTTGGTTCCAAAAGGAATAGTCTCTTTTAGTAAAGATTATACTCCAG
ATAAATACTATAATCAGTTTGTTCTTAATTTTCTTCAAAATGAGAATTTACGGTTAAATTCGGTATTGGTTCAGCGAAGA
AGTAATGGTGATAGGTATGTTACTAAGAAAAGTCTTAAAGAGACTAACCCTCAATCTAAAGATTTTTTGAGAAGATTTAC
TCAGGAGCATCCTGAGGTTTTAGAGCAGTTCAAAGAAGAGACCGATGTTGATTCTGTAAAAAATATCGAAATATCTGATA
TAAGTATTGGCGATGTAACAAGAGGCTTAATCGAAAGATTAAGACAAATGCCTGCTGGCTCTGAGACGGCAAGTGATTAT
CATAACATTATTATTGGTATTTTAGAGATTATGTTTTATCCTCATTTGATTAATCCAATAAAAGAACGAGAAATTCATGA
GGGGAGAAAAAGAATTGATATTTCATTTGATAATTCTGCAAAGCAAGGTATTTTTAGGAGGTTGTCTGAGAATATGAGGA
TTCCTTGCCCTTATGTTTTTGTTGAATGTAAAAATTATAGCCGCGAGATAGCTAATCCAGAGTTAGATCAAATTGGTGGT
AGGTTTTCAATTAATCGAGGACAAGTTGGGTTTATTGTTTGTCGACAAATTGATAATTTTCAATTGTTTATTGAACGTTG
TCGCGATACTTATAGAGATGGAAGAGGATTGATAATTCCATTGGTAGATCAAGACTTTATAGATATACTCCAAAACTATA
CTGATCTGAATTCGGAGTTTATAGAAACATTTTTATCAGACAGAGTTCGAGAGATCGCTATAAATTAA

Upstream 100 bases:

>100_bases
AGACAATTGACAGGGTAATAAAGCGAAGTTGGCTTGTTTGCTGTTCGTTTTACGAATATATTTCGTTAGTCTTAAATATT
TGTTAATAAAATTCAATACT

Downstream 100 bases:

>100_bases
CAACACATAATAGTATGTCATACTTGATGGACGGGATAGTCGTACCTTATATCAAAGTATACAGCTCGCATTAAAAATCG
GCGACCTCACAGGTTACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKLSQIYNLGKSQAELDFVDIDPSEDLPLFLDPFFLSIKKDNWSHEATLTLRSFFQQVIDLIRVNDEDGAKALFDHLHEP
NVTCLGMSVGDPRGRGVGNQDTDKIYESLLRSRAIQTGLIRDIEDNILFVDNFGKDKLSDMTTNIITKHLIEYTQNQCRL
NNIPLLDGINSGFYWDRYEGEWVSSHSQMLVYGDKKLLLVPKGIVSFSKDYTPDKYYNQFVLNFLQNENLRLNSVLVQRR
SNGDRYVTKKSLKETNPQSKDFLRRFTQEHPEVLEQFKEETDVDSVKNIEISDISIGDVTRGLIERLRQMPAGSETASDY
HNIIIGILEIMFYPHLINPIKEREIHEGRKRIDISFDNSAKQGIFRRLSENMRIPCPYVFVECKNYSREIANPELDQIGG
RFSINRGQVGFIVCRQIDNFQLFIERCRDTYRDGRGLIIPLVDQDFIDILQNYTDLNSEFIETFLSDRVREIAIN

Sequences:

>Translated_475_residues
MKLSQIYNLGKSQAELDFVDIDPSEDLPLFLDPFFLSIKKDNWSHEATLTLRSFFQQVIDLIRVNDEDGAKALFDHLHEP
NVTCLGMSVGDPRGRGVGNQDTDKIYESLLRSRAIQTGLIRDIEDNILFVDNFGKDKLSDMTTNIITKHLIEYTQNQCRL
NNIPLLDGINSGFYWDRYEGEWVSSHSQMLVYGDKKLLLVPKGIVSFSKDYTPDKYYNQFVLNFLQNENLRLNSVLVQRR
SNGDRYVTKKSLKETNPQSKDFLRRFTQEHPEVLEQFKEETDVDSVKNIEISDISIGDVTRGLIERLRQMPAGSETASDY
HNIIIGILEIMFYPHLINPIKEREIHEGRKRIDISFDNSAKQGIFRRLSENMRIPCPYVFVECKNYSREIANPELDQIGG
RFSINRGQVGFIVCRQIDNFQLFIERCRDTYRDGRGLIIPLVDQDFIDILQNYTDLNSEFIETFLSDRVREIAIN
>Mature_475_residues
MKLSQIYNLGKSQAELDFVDIDPSEDLPLFLDPFFLSIKKDNWSHEATLTLRSFFQQVIDLIRVNDEDGAKALFDHLHEP
NVTCLGMSVGDPRGRGVGNQDTDKIYESLLRSRAIQTGLIRDIEDNILFVDNFGKDKLSDMTTNIITKHLIEYTQNQCRL
NNIPLLDGINSGFYWDRYEGEWVSSHSQMLVYGDKKLLLVPKGIVSFSKDYTPDKYYNQFVLNFLQNENLRLNSVLVQRR
SNGDRYVTKKSLKETNPQSKDFLRRFTQEHPEVLEQFKEETDVDSVKNIEISDISIGDVTRGLIERLRQMPAGSETASDY
HNIIIGILEIMFYPHLINPIKEREIHEGRKRIDISFDNSAKQGIFRRLSENMRIPCPYVFVECKNYSREIANPELDQIGG
RFSINRGQVGFIVCRQIDNFQLFIERCRDTYRDGRGLIIPLVDQDFIDILQNYTDLNSEFIETFLSDRVREIAIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55153; Mature: 55153

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSQIYNLGKSQAELDFVDIDPSEDLPLFLDPFFLSIKKDNWSHEATLTLRSFFQQVID
CCHHHHHHCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHH
LIRVNDEDGAKALFDHLHEPNVTCLGMSVGDPRGRGVGNQDTDKIYESLLRSRAIQTGLI
HHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDIEDNILFVDNFGKDKLSDMTTNIITKHLIEYTQNQCRLNNIPLLDGINSGFYWDRYEG
HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCEECCCCC
EWVSSHSQMLVYGDKKLLLVPKGIVSFSKDYTPDKYYNQFVLNFLQNENLRLNSVLVQRR
CHHCCCCCEEEECCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHC
SNGDRYVTKKSLKETNPQSKDFLRRFTQEHPEVLEQFKEETDVDSVKNIEISDISIGDVT
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCHHHHH
RGLIERLRQMPAGSETASDYHNIIIGILEIMFYPHLINPIKEREIHEGRKRIDISFDNSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHEEEEEECCHH
KQGIFRRLSENMRIPCPYVFVECKNYSREIANPELDQIGGRFSINRGQVGFIVCRQIDNF
HHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCCHH
QLFIERCRDTYRDGRGLIIPLVDQDFIDILQNYTDLNSEFIETFLSDRVREIAIN
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSQIYNLGKSQAELDFVDIDPSEDLPLFLDPFFLSIKKDNWSHEATLTLRSFFQQVID
CCHHHHHHCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHH
LIRVNDEDGAKALFDHLHEPNVTCLGMSVGDPRGRGVGNQDTDKIYESLLRSRAIQTGLI
HHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDIEDNILFVDNFGKDKLSDMTTNIITKHLIEYTQNQCRLNNIPLLDGINSGFYWDRYEG
HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCEECCCCC
EWVSSHSQMLVYGDKKLLLVPKGIVSFSKDYTPDKYYNQFVLNFLQNENLRLNSVLVQRR
CHHCCCCCEEEECCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHC
SNGDRYVTKKSLKETNPQSKDFLRRFTQEHPEVLEQFKEETDVDSVKNIEISDISIGDVT
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCHHHHH
RGLIERLRQMPAGSETASDYHNIIIGILEIMFYPHLINPIKEREIHEGRKRIDISFDNSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHEEEEEECCHH
KQGIFRRLSENMRIPCPYVFVECKNYSREIANPELDQIGGRFSINRGQVGFIVCRQIDNF
HHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCCHH
QLFIERCRDTYRDGRGLIIPLVDQDFIDILQNYTDLNSEFIETFLSDRVREIAIN
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA