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The map label for this gene is yggU [C]

Identifier: 193212041

GI number: 193212041

Start: 397449

End: 397766

Strand: Direct

Name: yggU [C]

Synonym: Cpar_0370

Alternate gene names: 193212041

Gene position: 397449-397766 (Clockwise)

Preceding gene: 193212040

Following gene: 193212042

Centisome position: 17.36

GC content: 61.64

Gene sequence:

>318_bases
ATGCCTTTCATCAGCCAGAAGGGCGATGATGCCTGCCTCTCGGTGAGGGTGCAGCCCCGTTCTTCGAAAACAGGCATTGC
CGGCCGGTACGGAGATCAGGTCAAAATCTGCCTGAAGTCCGCTCCGGTGGACAATGCCGCCAACAAGGAGTGTTGCCAGT
TGCTGGCCAAAACGCTCGGCGTGCCACGCTCAAACGTGTCGGTCATGAACGGCCAGACCTCGCGCAGCAAGGTGCTGAAG
GTGGAGGGCATGACGCCCTCCGAGCTTCGCAAAGCGCTCGCTCCCGTGCTCGGCGATGAATCGGAGGCGGGCGCATGA

Upstream 100 bases:

>100_bases
GATGTGGAGCATACGCCGCTCTCCAACGAGGAGGCGCTGAAAAATGCTCCCGACCGCCAGGATCGCTTTTTCAAGGTGCC
GAAGGTGATCGGCTGAGCCG

Downstream 100 bases:

>100_bases
GGTGTGTTGTGCAGCGGGTGCGCGAGGCGAGCGTTACCATCGGCGGTGAACGTTTCAGCTCTATCGGCGCGGGGCTGCTC
GTGCTGGCCGGAATCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPFISQKGDDACLSVRVQPRSSKTGIAGRYGDQVKICLKSAPVDNAANKECCQLLAKTLGVPRSNVSVMNGQTSRSKVLK
VEGMTPSELRKALAPVLGDESEAGA

Sequences:

>Translated_105_residues
MPFISQKGDDACLSVRVQPRSSKTGIAGRYGDQVKICLKSAPVDNAANKECCQLLAKTLGVPRSNVSVMNGQTSRSKVLK
VEGMTPSELRKALAPVLGDESEAGA
>Mature_104_residues
PFISQKGDDACLSVRVQPRSSKTGIAGRYGDQVKICLKSAPVDNAANKECCQLLAKTLGVPRSNVSVMNGQTSRSKVLKV
EGMTPSELRKALAPVLGDESEAGA

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y370_CHLP8 (B3QL06)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001997994.1
- ProteinModelPortal:   B3QL06
- GeneID:   6419284
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0370
- HOGENOM:   HBG472132
- OMA:   AANKECC
- ProtClustDB:   CLSK2303962
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 11062; Mature: 10931

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFISQKGDDACLSVRVQPRSSKTGIAGRYGDQVKICLKSAPVDNAANKECCQLLAKTLG
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
VPRSNVSVMNGQTSRSKVLKVEGMTPSELRKALAPVLGDESEAGA
CCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PFISQKGDDACLSVRVQPRSSKTGIAGRYGDQVKICLKSAPVDNAANKECCQLLAKTLG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
VPRSNVSVMNGQTSRSKVLKVEGMTPSELRKALAPVLGDESEAGA
CCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA