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The map label for this gene is gatC

Identifier: 193212040

GI number: 193212040

Start: 397157

End: 397444

Strand: Direct

Name: gatC

Synonym: Cpar_0369

Alternate gene names: 193212040

Gene position: 397157-397444 (Clockwise)

Preceding gene: 193212039

Following gene: 193212041

Centisome position: 17.35

GC content: 54.51

Gene sequence:

>288_bases
ATGTCTGTCACTACAAAAGATGTTGCCTATATCGCGGAACTTGCCCGCCTGAAATTCACCGATGCCGAGCAGGAACGGAT
GACCGATGAGCTGAACATGATTTTGCACTATGTCGACAAGCTCAACGAGGTCGATACCGAGGGGGTCGAGCCGCTCAACA
CGATTCACGACCAGATCAACGTGCTTCGTGCCGATGTGGAGCATACGCCGCTCTCCAACGAGGAGGCGCTGAAAAATGCT
CCCGACCGCCAGGATCGCTTTTTCAAGGTGCCGAAGGTGATCGGCTGA

Upstream 100 bases:

>100_bases
TCCGAGCAGGGGCGATGACGAAGAGAAGTTTGGCATCTGCAGGCTCTGATTTTGATCTGCCAAACGTAAGGTATTTGTTT
TCATTAAATGGATTTACACT

Downstream 100 bases:

>100_bases
GCCGATGCCTTTCATCAGCCAGAAGGGCGATGATGCCTGCCTCTCGGTGAGGGTGCAGCCCCGTTCTTCGAAAACAGGCA
TTGCCGGCCGGTACGGAGAT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVTTKDVAYIAELARLKFTDAEQERMTDELNMILHYVDKLNEVDTEGVEPLNTIHDQINVLRADVEHTPLSNEEALKNA
PDRQDRFFKVPKVIG

Sequences:

>Translated_95_residues
MSVTTKDVAYIAELARLKFTDAEQERMTDELNMILHYVDKLNEVDTEGVEPLNTIHDQINVLRADVEHTPLSNEEALKNA
PDRQDRFFKVPKVIG
>Mature_94_residues
SVTTKDVAYIAELARLKFTDAEQERMTDELNMILHYVDKLNEVDTEGVEPLNTIHDQINVLRADVEHTPLSNEEALKNAP
DRQDRFFKVPKVIG

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CHLP8 (B3QL05)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001997993.1
- GeneID:   6419283
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0369
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10895; Mature: 10764

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTTKDVAYIAELARLKFTDAEQERMTDELNMILHYVDKLNEVDTEGVEPLNTIHDQIN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLRADVEHTPLSNEEALKNAPDRQDRFFKVPKVIG
HHHHHHCCCCCCCHHHHHCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
SVTTKDVAYIAELARLKFTDAEQERMTDELNMILHYVDKLNEVDTEGVEPLNTIHDQIN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLRADVEHTPLSNEEALKNAPDRQDRFFKVPKVIG
HHHHHHCCCCCCCHHHHHCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA