| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212030
Identifier: 193212030
GI number: 193212030
Start: 383038
End: 383517
Strand: Direct
Name: 193212030
Synonym: Cpar_0359
Alternate gene names: NA
Gene position: 383038-383517 (Clockwise)
Preceding gene: 193212025
Following gene: 193212031
Centisome position: 16.73
GC content: 57.71
Gene sequence:
>480_bases ATGGGCACGATTGACGATTATCGAACCGGTAAAATTGTCGAGGGTATCCGGAAGGCAGAATCGGCGCTTGATAACAGAAA TTCATTTTCGGCTGACGATCCGGTGTTCGGGCATATTCGGGAAAAGATTGTGGCTTTCAAGCCAGTCTGGATCGCGAAGG AACAGGCCGTCGAGATGATTCAGCAGTCGCGTACCCTTGCTGTCGGCGAGCGGGTTTGCCGGGCGTTGCATCCGGAGTCG CCGGAAACGCAAACCGTGTTTCTCGACGAGCTTGCCGAAGCGATGGCGGGGGCAGGCAAGGCCGAAATCGTGACGACGGC GGAGGCGGCGCAGCTCGTCAACCGGCAGTCGCGCGACCGGATCATCGCCTCGATGGTGAGCGGCAACTACCTCGAACTCT GCTCGGCGCACCCTTCTGATTGCATCTTCTGCAAAGCTGAACGAGCTGGAATCAGGTGTTTTCCGGAGACTCTTCGGTAG
Upstream 100 bases:
>100_bases CTTCGGCTTTCAGAGCAATATAGGACAAAGACAAAAAGGTGGGGTTATATTGAAAAAACGTAGTATCGGATTTGTCTTGA AATTAATGGTTTAGCGAGAC
Downstream 100 bases:
>100_bases CTTCGGTTGTGTGAGTGAGTGAGCATCGCTAACTTGCGGAAAGCATTTTTCCCACTAAAATCGGAATTGCTATGAGTGCA CTCACGCTGTTGACCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGTIDDYRTGKIVEGIRKAESALDNRNSFSADDPVFGHIREKIVAFKPVWIAKEQAVEMIQQSRTLAVGERVCRALHPES PETQTVFLDELAEAMAGAGKAEIVTTAEAAQLVNRQSRDRIIASMVSGNYLELCSAHPSDCIFCKAERAGIRCFPETLR
Sequences:
>Translated_159_residues MGTIDDYRTGKIVEGIRKAESALDNRNSFSADDPVFGHIREKIVAFKPVWIAKEQAVEMIQQSRTLAVGERVCRALHPES PETQTVFLDELAEAMAGAGKAEIVTTAEAAQLVNRQSRDRIIASMVSGNYLELCSAHPSDCIFCKAERAGIRCFPETLR >Mature_158_residues GTIDDYRTGKIVEGIRKAESALDNRNSFSADDPVFGHIREKIVAFKPVWIAKEQAVEMIQQSRTLAVGERVCRALHPESP ETQTVFLDELAEAMAGAGKAEIVTTAEAAQLVNRQSRDRIIASMVSGNYLELCSAHPSDCIFCKAERAGIRCFPETLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17540; Mature: 17409
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIDDYRTGKIVEGIRKAESALDNRNSFSADDPVFGHIREKIVAFKPVWIAKEQAVEMI CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH QQSRTLAVGERVCRALHPESPETQTVFLDELAEAMAGAGKAEIVTTAEAAQLVNRQSRDR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH IIASMVSGNYLELCSAHPSDCIFCKAERAGIRCFPETLR HHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHCC >Mature Secondary Structure GTIDDYRTGKIVEGIRKAESALDNRNSFSADDPVFGHIREKIVAFKPVWIAKEQAVEMI CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH QQSRTLAVGERVCRALHPESPETQTVFLDELAEAMAGAGKAEIVTTAEAAQLVNRQSRDR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH IIASMVSGNYLELCSAHPSDCIFCKAERAGIRCFPETLR HHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA