| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212025
Identifier: 193212025
GI number: 193212025
Start: 377997
End: 378524
Strand: Direct
Name: 193212025
Synonym: Cpar_0354
Alternate gene names: NA
Gene position: 377997-378524 (Clockwise)
Preceding gene: 193212024
Following gene: 193212030
Centisome position: 16.51
GC content: 56.63
Gene sequence:
>528_bases ATGGGTATAGACGTTATTCCGGCCCGTCCATCGAAAAACACGGCGATCGCGCTTGGCGCGGCGTTGCTGTTGCTGACGAC CACGGTGCCCTACCTGACGCTTATCAATGCCTTCCTTTTTGCCGGCATTATCATGTCGGGAGCGGTTGCCGCCTGGTTCT ACATCATGCGTCATCAGGTGCGGCTCAGCTATCCCGAGTCGTTCGTGCTTGGCGCTGTCAGCGGGTTTTTCGGCGGTGCG TTATCGGTGCTTGCCGGATTTCTGCTGGAGAGATGGTTTGGCTATGTGCCGGGTCTCGAAAGCCTCAAGCTGCTGGCCGA CTGGGCGAGCAGCATAGATTCCGGTGATGCCGAGACCATCCGTCAGATGCTTGCGCTGGTCAGCGCACCGAAAGAGATCA GCTTGGCAGATCTGATTATCAGCATGCTTTTCACGGGCATTTTTTATGCTCCATTCTCCGGCCTCGGCGGTCGCCTGACG GTGTTTGTGCTCAAGCGGAAGGCAAAGAAGAGCGCTGTTAGCAAGTAA
Upstream 100 bases:
>100_bases CGCCGTTCGCGCCGCCGAATGGCTCGCCCAGCAGCACGCCGCAAAGCCGGGCTTCTACACGATGGACGATTTCCTGAACG ATCTCTTTTCGGCCTGAAGG
Downstream 100 bases:
>100_bases CGGGTAACAAATTGCCTGTAGGGGGGCAGCCCTCGCGGCTGCCTTTTTTGTTGTATTTCAGGGTGTCGTTGAAAGAAAAA GGACTGCAAAGACGGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGIDVIPARPSKNTAIALGAALLLLTTTVPYLTLINAFLFAGIIMSGAVAAWFYIMRHQVRLSYPESFVLGAVSGFFGGA LSVLAGFLLERWFGYVPGLESLKLLADWASSIDSGDAETIRQMLALVSAPKEISLADLIISMLFTGIFYAPFSGLGGRLT VFVLKRKAKKSAVSK
Sequences:
>Translated_175_residues MGIDVIPARPSKNTAIALGAALLLLTTTVPYLTLINAFLFAGIIMSGAVAAWFYIMRHQVRLSYPESFVLGAVSGFFGGA LSVLAGFLLERWFGYVPGLESLKLLADWASSIDSGDAETIRQMLALVSAPKEISLADLIISMLFTGIFYAPFSGLGGRLT VFVLKRKAKKSAVSK >Mature_174_residues GIDVIPARPSKNTAIALGAALLLLTTTVPYLTLINAFLFAGIIMSGAVAAWFYIMRHQVRLSYPESFVLGAVSGFFGGAL SVLAGFLLERWFGYVPGLESLKLLADWASSIDSGDAETIRQMLALVSAPKEISLADLIISMLFTGIFYAPFSGLGGRLTV FVLKRKAKKSAVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18737; Mature: 18606
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDVIPARPSKNTAIALGAALLLLTTTVPYLTLINAFLFAGIIMSGAVAAWFYIMRHQV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSYPESFVLGAVSGFFGGALSVLAGFLLERWFGYVPGLESLKLLADWASSIDSGDAETI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH RQMLALVSAPKEISLADLIISMLFTGIFYAPFSGLGGRLTVFVLKRKAKKSAVSK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GIDVIPARPSKNTAIALGAALLLLTTTVPYLTLINAFLFAGIIMSGAVAAWFYIMRHQV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSYPESFVLGAVSGFFGGALSVLAGFLLERWFGYVPGLESLKLLADWASSIDSGDAETI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH RQMLALVSAPKEISLADLIISMLFTGIFYAPFSGLGGRLTVFVLKRKAKKSAVSK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA