| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is yeaK [C]
Identifier: 193212001
GI number: 193212001
Start: 349916
End: 350383
Strand: Direct
Name: yeaK [C]
Synonym: Cpar_0330
Alternate gene names: 193212001
Gene position: 349916-350383 (Clockwise)
Preceding gene: 193212000
Following gene: 193212002
Centisome position: 15.29
GC content: 58.33
Gene sequence:
>468_bases ATGCCCATCAGAAAGTTGCGGGAGTTTCTCGACAGTCACCACATCAAGTATTTCGTCTTCAGCCATTCACCGGCTTACAC CGCGCAGGAGATTGCCGAGTCGGCCCACGTGTCGGGCAAAGAGATGGTTAAGACCGTGATGGTCAACATCGACGGACGTA TGGCGATGGCTTTGCTGCCTGCTTCGCGCCAGCTCGATTTCGACAAACTGCGGATGCTGTGCGGCACGCGCGACGTCAAG CTTGCCGAAGAGGAGGAGTTCAGCGATCTCTTTCCGGAGTGCGAGATCGGGGCGATGCCGCCGTTCGGCAATCTCTACGC CATGGAGGTTTACGCCGACGAAGCGCTCGACGAGGATGTCGATATCGCCTTCAACGCCGGGGCTCACACCGAACTGCTCA GGATGGGCTGGGAAGATTACAAGCGCTTGGCCGCTCCCGTTATCGCCCCTATCTCCGTCGGGTTGTAA
Upstream 100 bases:
>100_bases TTACCCTGTCCGGCCTCTCTTTACCGGATTCGAGCCGTTGCCGCCAATCGAGCGGATTCGATATAAACGAAAGCCAAACA CTGAATCAAAGGAGGAGACG
Downstream 100 bases:
>100_bases CCTTGCAGCCGCTCAGCGCCGCACCGCACAGGCGGTAGGACGCAACCGGCAATGCGGCTTTTTGGACGGGAAGTATTACC TTTGACAGAGCTTTCCCGAT
Product: YbaK/prolyl-tRNA synthetase associated protein
Products: NA
Alternate protein names: YbaK/Aminoacyl-TRNA Synthetase Associated Region; YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPIRKLREFLDSHHIKYFVFSHSPAYTAQEIAESAHVSGKEMVKTVMVNIDGRMAMALLPASRQLDFDKLRMLCGTRDVK LAEEEEFSDLFPECEIGAMPPFGNLYAMEVYADEALDEDVDIAFNAGAHTELLRMGWEDYKRLAAPVIAPISVGL
Sequences:
>Translated_155_residues MPIRKLREFLDSHHIKYFVFSHSPAYTAQEIAESAHVSGKEMVKTVMVNIDGRMAMALLPASRQLDFDKLRMLCGTRDVK LAEEEEFSDLFPECEIGAMPPFGNLYAMEVYADEALDEDVDIAFNAGAHTELLRMGWEDYKRLAAPVIAPISVGL >Mature_154_residues PIRKLREFLDSHHIKYFVFSHSPAYTAQEIAESAHVSGKEMVKTVMVNIDGRMAMALLPASRQLDFDKLRMLCGTRDVKL AEEEEFSDLFPECEIGAMPPFGNLYAMEVYADEALDEDVDIAFNAGAHTELLRMGWEDYKRLAAPVIAPISVGL
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17426; Mature: 17295
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRKLREFLDSHHIKYFVFSHSPAYTAQEIAESAHVSGKEMVKTVMVNIDGRMAMALLP CCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECC ASRQLDFDKLRMLCGTRDVKLAEEEEFSDLFPECEIGAMPPFGNLYAMEVYADEALDEDV CCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCC DIAFNAGAHTELLRMGWEDYKRLAAPVIAPISVGL CEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIRKLREFLDSHHIKYFVFSHSPAYTAQEIAESAHVSGKEMVKTVMVNIDGRMAMALLP CHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECC ASRQLDFDKLRMLCGTRDVKLAEEEEFSDLFPECEIGAMPPFGNLYAMEVYADEALDEDV CCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCC DIAFNAGAHTELLRMGWEDYKRLAAPVIAPISVGL CEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA