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The map label for this gene is ylbK [H]

Identifier: 193212000

GI number: 193212000

Start: 348901

End: 349680

Strand: Direct

Name: ylbK [H]

Synonym: Cpar_0329

Alternate gene names: 193212000

Gene position: 348901-349680 (Clockwise)

Preceding gene: 193211999

Following gene: 193212001

Centisome position: 15.24

GC content: 59.49

Gene sequence:

>780_bases
ATGGACAAGGCAAACAGCGAATCGAATCTCACGGGACTGGCATTTGGCGGCGGCGCGGTGCTTGGCGCGGCGCACATCGG
TGTGCTCAAGGCGATGCACGAAACCGGCTTTCGCGCAGACTGCGTTGCGGGCACCAGCATCGGCTCGTTCGTGGCGGCCC
TGCACGCTTTCGGCAAGAGCTGGGAGGAGATCGAACAGATTGCGGTGGATCTGGACTGGTTCGATCTTTCGGGGCTTGCT
CTCTCCAGCTACGGTTTGCTGTCGAACCGGAAGTTCGGGAGGCTCGTACTGAAGAAGCTCGGGCGGAAACGCATCGAGGA
TGCGCCGATTCCGCTGGCCATTGTCGCCACCGACATCTGTACTGGCGAGAAGGTGGTGATGCGCAAGGGGAGCGTGGCCA
CGGCGGTGATGGCTAGCTCCTCCATTCCCGGAATCTTCAACCCGGTCAAGCAGAAGCAGATGCTGCTTGTCGATGGCCTG
CTTACCGAGAACGTGCCCGTTTCTCCACTCAAGGAGATGGGGGCGAGCCGCATTGTCTGCATCGACCTGCTTGGTCGCCA
CTCCTATCGTAAGCCTGAGCATCTGGCAATGCTGCTCATGAACGCTTTTTACAGCGCCATGCGCACCATGTCCGAGATTC
AGATGGAGGCAGCCGATCTGGTGATTCGTCCCAATCTTTCCGATTTCAGCCTTGTCGATATTTCTGCCGTGCCGGAGATT
TTCGAAGCCGGGTACCGCGAAGCGCTGCCGCTGCTCGAAACGTGGATGGCGAAGGCGTGA

Upstream 100 bases:

>100_bases
TGCCGGAGCGGTTTTCCCGATCCCGATCTGCGCTATCCCCCTTACACTGCCTGCCGGTTCGGGCTGCTTAAACGAATCGT
CACTTTTTTTTCATAGCATC

Downstream 100 bases:

>100_bases
TGCGGTTCTGCTTCCGGAGCTGAGGCTCTTGCTGCGGCCTGTGCTTTTTCGTACAATGAAAGAATTCCTCTTGTTTGAAG
CCTGACCGCCCAGCCTGCGG

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDKANSESNLTGLAFGGGAVLGAAHIGVLKAMHETGFRADCVAGTSIGSFVAALHAFGKSWEEIEQIAVDLDWFDLSGLA
LSSYGLLSNRKFGRLVLKKLGRKRIEDAPIPLAIVATDICTGEKVVMRKGSVATAVMASSSIPGIFNPVKQKQMLLVDGL
LTENVPVSPLKEMGASRIVCIDLLGRHSYRKPEHLAMLLMNAFYSAMRTMSEIQMEAADLVIRPNLSDFSLVDISAVPEI
FEAGYREALPLLETWMAKA

Sequences:

>Translated_259_residues
MDKANSESNLTGLAFGGGAVLGAAHIGVLKAMHETGFRADCVAGTSIGSFVAALHAFGKSWEEIEQIAVDLDWFDLSGLA
LSSYGLLSNRKFGRLVLKKLGRKRIEDAPIPLAIVATDICTGEKVVMRKGSVATAVMASSSIPGIFNPVKQKQMLLVDGL
LTENVPVSPLKEMGASRIVCIDLLGRHSYRKPEHLAMLLMNAFYSAMRTMSEIQMEAADLVIRPNLSDFSLVDISAVPEI
FEAGYREALPLLETWMAKA
>Mature_259_residues
MDKANSESNLTGLAFGGGAVLGAAHIGVLKAMHETGFRADCVAGTSIGSFVAALHAFGKSWEEIEQIAVDLDWFDLSGLA
LSSYGLLSNRKFGRLVLKKLGRKRIEDAPIPLAIVATDICTGEKVVMRKGSVATAVMASSSIPGIFNPVKQKQMLLVDGL
LTENVPVSPLKEMGASRIVCIDLLGRHSYRKPEHLAMLLMNAFYSAMRTMSEIQMEAADLVIRPNLSDFSLVDISAVPEI
FEAGYREALPLLETWMAKA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=286, Percent_Identity=26.5734265734266, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI260656043, Length=286, Percent_Identity=26.5734265734266, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI260656041, Length=286, Percent_Identity=26.5734265734266, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI116256487, Length=286, Percent_Identity=26.5734265734266, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI260656037, Length=286, Percent_Identity=26.5734265734266, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148727335, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI148727290, Length=281, Percent_Identity=26.6903914590747, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI226510936, Length=175, Percent_Identity=33.7142857142857, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71997289, Length=258, Percent_Identity=25.968992248062, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71997299, Length=258, Percent_Identity=25.968992248062, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193204778, Length=187, Percent_Identity=29.9465240641711, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=274, Percent_Identity=27.7372262773723, Blast_Score=96, Evalue=5e-21,
Organism=Drosophila melanogaster, GI281376913, Length=285, Percent_Identity=29.1228070175439, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI28571388, Length=285, Percent_Identity=28.0701754385965, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 27940; Mature: 27940

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKANSESNLTGLAFGGGAVLGAAHIGVLKAMHETGFRADCVAGTSIGSFVAALHAFGKS
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCC
WEEIEQIAVDLDWFDLSGLALSSYGLLSNRKFGRLVLKKLGRKRIEDAPIPLAIVATDIC
HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHC
TGEKVVMRKGSVATAVMASSSIPGIFNPVKQKQMLLVDGLLTENVPVSPLKEMGASRIVC
CCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEE
IDLLGRHSYRKPEHLAMLLMNAFYSAMRTMSEIQMEAADLVIRPNLSDFSLVDISAVPEI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEEHHHHHHH
FEAGYREALPLLETWMAKA
HHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKANSESNLTGLAFGGGAVLGAAHIGVLKAMHETGFRADCVAGTSIGSFVAALHAFGKS
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCC
WEEIEQIAVDLDWFDLSGLALSSYGLLSNRKFGRLVLKKLGRKRIEDAPIPLAIVATDIC
HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHC
TGEKVVMRKGSVATAVMASSSIPGIFNPVKQKQMLLVDGLLTENVPVSPLKEMGASRIVC
CCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEE
IDLLGRHSYRKPEHLAMLLMNAFYSAMRTMSEIQMEAADLVIRPNLSDFSLVDISAVPEI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEEHHHHHHH
FEAGYREALPLLETWMAKA
HHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]