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The map label for this gene is yrdA [H]

Identifier: 193211976

GI number: 193211976

Start: 320550

End: 321080

Strand: Direct

Name: yrdA [H]

Synonym: Cpar_0303

Alternate gene names: 193211976

Gene position: 320550-321080 (Clockwise)

Preceding gene: 193211975

Following gene: 193211977

Centisome position: 14.0

GC content: 60.64

Gene sequence:

>531_bases
ATGAGAAAAGTCATGTCATATCGGGGCTTGAACCCGGAGATTCACGAGTCGGTGTTCCTTGCCGACGGTTGCCGGGTTAT
CGGTGACGTCAAGATCGGCGAGCATTCGAGCGTCTGGTTCAACACGGTCATCCGCGGTGACGTCTGCCCGATCACCATCG
GTGAAAAGACCAGCGTGCAGGACAACTCGACCTTGCACGTGACGCACGATACCGGCCCGCTGAAGATCGGCAGCAACGTG
ACCATCGGCCATGCCGCTACGCTGCACGCCTGCACGGTCGAGGACAACGTGCTGATCGGCATGAGCGCCACGCTGCTGGA
TCATTGCGTGGTCGAACCCTGGTCGATCGTGGCCGCCGGATCGCTCGTCAAGCAGGGCTTCCGCGTGCCGACCGGAATGC
TTGTCGCCGGAGTTCCGGCCAAGGTGATCCGCCCGATTACCGATGATGAGCGGAAGAACATTGCAGAGTCGCCCGAAAAC
TACGTGCGCTACGTTGCCCATTACCGTGAGGGCGGCTACGAGGGGAGGTAA

Upstream 100 bases:

>100_bases
TTGTCGATCATTTTACACGCGTCCATTTTCAAGTCGGCGGGAAAAGCGGTAAGCTCCGAAACGTTTCTCTCGTTTTCACA
CACTTAACTGAGCGTTTTTC

Downstream 100 bases:

>100_bases
AGGCCGTTACGTTTTGAGGCGATCTTTCGCTACATTACCATTCATCAAATTCGGCAGTGAGCCGTGAGGATAACGAACTC
GTCACGGCTCAGGCTCTCTT

Product: CysE/LacA/LpxA/NodL family acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRKVMSYRGLNPEIHESVFLADGCRVIGDVKIGEHSSVWFNTVIRGDVCPITIGEKTSVQDNSTLHVTHDTGPLKIGSNV
TIGHAATLHACTVEDNVLIGMSATLLDHCVVEPWSIVAAGSLVKQGFRVPTGMLVAGVPAKVIRPITDDERKNIAESPEN
YVRYVAHYREGGYEGR

Sequences:

>Translated_176_residues
MRKVMSYRGLNPEIHESVFLADGCRVIGDVKIGEHSSVWFNTVIRGDVCPITIGEKTSVQDNSTLHVTHDTGPLKIGSNV
TIGHAATLHACTVEDNVLIGMSATLLDHCVVEPWSIVAAGSLVKQGFRVPTGMLVAGVPAKVIRPITDDERKNIAESPEN
YVRYVAHYREGGYEGR
>Mature_176_residues
MRKVMSYRGLNPEIHESVFLADGCRVIGDVKIGEHSSVWFNTVIRGDVCPITIGEKTSVQDNSTLHVTHDTGPLKIGSNV
TIGHAATLHACTVEDNVLIGMSATLLDHCVVEPWSIVAAGSLVKQGFRVPTGMLVAGVPAKVIRPITDDERKNIAESPEN
YVRYVAHYREGGYEGR

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=43.1034482758621, Blast_Score=147, Evalue=3e-37,
Organism=Escherichia coli, GI87081681, Length=145, Percent_Identity=35.1724137931034, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787667, Length=142, Percent_Identity=35.2112676056338, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19136; Mature: 19136

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVMSYRGLNPEIHESVFLADGCRVIGDVKIGEHSSVWFNTVIRGDVCPITIGEKTSVQ
CCCCCCCCCCCHHHHHEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCC
DNSTLHVTHDTGPLKIGSNVTIGHAATLHACTVEDNVLIGMSATLLDHCVVEPWSIVAAG
CCCEEEEEECCCCEEECCCEEECCCEEEEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHH
SLVKQGFRVPTGMLVAGVPAKVIRPITDDERKNIAESPENYVRYVAHYREGGYEGR
HHHHCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKVMSYRGLNPEIHESVFLADGCRVIGDVKIGEHSSVWFNTVIRGDVCPITIGEKTSVQ
CCCCCCCCCCCHHHHHEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCC
DNSTLHVTHDTGPLKIGSNVTIGHAATLHACTVEDNVLIGMSATLLDHCVVEPWSIVAAG
CCCEEEEEECCCCEEECCCEEECCCEEEEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHH
SLVKQGFRVPTGMLVAGVPAKVIRPITDDERKNIAESPENYVRYVAHYREGGYEGR
HHHHCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]