| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is aroA
Identifier: 193211963
GI number: 193211963
Start: 308797
End: 310101
Strand: Direct
Name: aroA
Synonym: Cpar_0290
Alternate gene names: 193211963
Gene position: 308797-310101 (Clockwise)
Preceding gene: 193211962
Following gene: 193211964
Centisome position: 13.49
GC content: 64.67
Gene sequence:
>1305_bases ATGAGCGTCTTTCAGGGCGAAGTTTCGAGCCTTCCGCCGGATAAATCGATATCGCATCGCGCAGCCATCATCGGTTCGCT TGCCGAAGGAACGACCGAAATCACCAACTTTTCGGGCGGATTCGACAACCAATCGACCCTGTCGGTGCTGCGGGATCTCG GAATCTCTGTCCGGCAGGATGAAGTTCCCGCTGGTGACGGTCGGATCGTCCGGCATGTCGTCATCGAATCGAACGGGCTC TGGAGCTTCCGCGAGCCGTCGGAGCCGCTGATGTGCAACAACTCCGGCAGCACGATGCGCATGATGGCGGGCATCCTCGC CGCGCAGCCCTTCCGGAGCGAGCTGGTCGGCGACGCCTCGTTGATGAAGCGCCCGATGAAGCGCGTGGCCGATCCGCTGC GGATGATGGGCGCGGACATTTCGCTCTCCGACGCCGGAACCGCGCCGGTGGTCATCAATGGCACGAAGGATTTGAAAACC ATCGAGTACCTGCTTCCGGTTCCGTCGGCGCAGGTCAAGTCGCTCGTGGCGCTGGCCGCGCTGCACGCCGATGGCCAGTC GAAGATCATCGAGCCGATCCGCTCCCGCGACCACACCGAGCTGATGCTGGGCCTCGAAACCATCGACCGCCCCGACGGCG TGCGCGAAATCATCATCGACGGGCGCAAGCCGATTGCGGCCAAACCGTTCAAGGTGCCCGCCGATCCATCGGCAGCGTGC TTCATGATCGCCCTCGGCCTGCTCGGCGAGCGCTCGGAAATCGTGCTGCGCGACGTCTGCCTCAACCCGACGCGCGTGGC CTACATCGACGTGCTTCAGGAGGCGGGCGCGGGCCTCGGCATCGAGAACGTGCGCTCGGAGGGCGGCGAACCGGTGGGCG ACATCGTCGTACGGAGCTGCTCTAGCCTCGCGCCGCTGCGCATCAGCGACCACGCGGTGGTGGCGGGCGTGATCGACGAA CTGCCGATGCTCGCCGTGCTCTCGGCCTTCGCCACAGGGGAGTTCGAGCTGCACAACGCCACCGAGCTGCGCACCAAGGA GAGCGACCGCATCGAGGCGGTGGTGAGCAATCTGGAGCGCCTCGGCTTTGCGTGTGAGCAGTACCCCGACGGTTTCGTGG TGAAGGGACGTCCGACGGTCAACCGCGAAGAAGCTGTCATCGAGTGTTTCGACGACCACCGCATCGCCATGAGCTTCGCC ATCGCCGCCGAAGCCGCAGGCGCATCGCTGCGCCTCTCGGATCGCGAAGTGGCGGGCGTCTCGTTCCCGAACTTCTTCGC ACTGATCGAGTCGTTGAAGCAGTAG
Upstream 100 bases:
>100_bases ATTCCCGCTTGCGCGGGAATGACGGATAAAATCGAGACCTTGTTTTACTGTTGTACATTGTTTTTTAAGACAGCCTTTTT TCAACCAAAATCACGCATCC
Downstream 100 bases:
>100_bases GTTTTAGTATTCAGGAGTCCCGAAAGCTTTCGGGATGACGGACATTCAATGCTTACATTTTCTTCAGTTGCCCCGGAACT TTAGTCCGGGGTTGATGAAT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSVFQGEVSSLPPDKSISHRAAIIGSLAEGTTEITNFSGGFDNQSTLSVLRDLGISVRQDEVPAGDGRIVRHVVIESNGL WSFREPSEPLMCNNSGSTMRMMAGILAAQPFRSELVGDASLMKRPMKRVADPLRMMGADISLSDAGTAPVVINGTKDLKT IEYLLPVPSAQVKSLVALAALHADGQSKIIEPIRSRDHTELMLGLETIDRPDGVREIIIDGRKPIAAKPFKVPADPSAAC FMIALGLLGERSEIVLRDVCLNPTRVAYIDVLQEAGAGLGIENVRSEGGEPVGDIVVRSCSSLAPLRISDHAVVAGVIDE LPMLAVLSAFATGEFELHNATELRTKESDRIEAVVSNLERLGFACEQYPDGFVVKGRPTVNREEAVIECFDDHRIAMSFA IAAEAAGASLRLSDREVAGVSFPNFFALIESLKQ
Sequences:
>Translated_434_residues MSVFQGEVSSLPPDKSISHRAAIIGSLAEGTTEITNFSGGFDNQSTLSVLRDLGISVRQDEVPAGDGRIVRHVVIESNGL WSFREPSEPLMCNNSGSTMRMMAGILAAQPFRSELVGDASLMKRPMKRVADPLRMMGADISLSDAGTAPVVINGTKDLKT IEYLLPVPSAQVKSLVALAALHADGQSKIIEPIRSRDHTELMLGLETIDRPDGVREIIIDGRKPIAAKPFKVPADPSAAC FMIALGLLGERSEIVLRDVCLNPTRVAYIDVLQEAGAGLGIENVRSEGGEPVGDIVVRSCSSLAPLRISDHAVVAGVIDE LPMLAVLSAFATGEFELHNATELRTKESDRIEAVVSNLERLGFACEQYPDGFVVKGRPTVNREEAVIECFDDHRIAMSFA IAAEAAGASLRLSDREVAGVSFPNFFALIESLKQ >Mature_433_residues SVFQGEVSSLPPDKSISHRAAIIGSLAEGTTEITNFSGGFDNQSTLSVLRDLGISVRQDEVPAGDGRIVRHVVIESNGLW SFREPSEPLMCNNSGSTMRMMAGILAAQPFRSELVGDASLMKRPMKRVADPLRMMGADISLSDAGTAPVVINGTKDLKTI EYLLPVPSAQVKSLVALAALHADGQSKIIEPIRSRDHTELMLGLETIDRPDGVREIIIDGRKPIAAKPFKVPADPSAACF MIALGLLGERSEIVLRDVCLNPTRVAYIDVLQEAGAGLGIENVRSEGGEPVGDIVVRSCSSLAPLRISDHAVVAGVIDEL PMLAVLSAFATGEFELHNATELRTKESDRIEAVVSNLERLGFACEQYPDGFVVKGRPTVNREEAVIECFDDHRIAMSFAI AAEAAGASLRLSDREVAGVSFPNFFALIESLKQ
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=436, Percent_Identity=24.0825688073394, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_CHLP8 (B3QQU6)
Other databases:
- EMBL: CP001099 - RefSeq: YP_001997916.1 - GeneID: 6419203 - GenomeReviews: CP001099_GR - KEGG: cpc:Cpar_0290 - HOGENOM: HBG646626 - OMA: LSRNHTE - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46571; Mature: 46440
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFQGEVSSLPPDKSISHRAAIIGSLAEGTTEITNFSGGFDNQSTLSVLRDLGISVRQD CCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCEEECC EVPAGDGRIVRHVVIESNGLWSFREPSEPLMCNNSGSTMRMMAGILAAQPFRSELVGDAS CCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCCHH LMKRPMKRVADPLRMMGADISLSDAGTAPVVINGTKDLKTIEYLLPVPSAQVKSLVALAA HHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHH LHADGQSKIIEPIRSRDHTELMLGLETIDRPDGVREIIIDGRKPIAAKPFKVPADPSAAC HHCCCHHHHHHHHHCCCCHHEEEEHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHH FMIALGLLGERSEIVLRDVCLNPTRVAYIDVLQEAGAGLGIENVRSEGGEPVGDIVVRSC HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHH SSLAPLRISDHAVVAGVIDELPMLAVLSAFATGEFELHNATELRTKESDRIEAVVSNLER CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHHHHHHHHHHH LGFACEQYPDGFVVKGRPTVNREEAVIECFDDHRIAMSFAIAAEAAGASLRLSDREVAGV HCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEECCCCCCCC SFPNFFALIESLKQ CCHHHHHHHHHHCC >Mature Secondary Structure SVFQGEVSSLPPDKSISHRAAIIGSLAEGTTEITNFSGGFDNQSTLSVLRDLGISVRQD CCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCEEECC EVPAGDGRIVRHVVIESNGLWSFREPSEPLMCNNSGSTMRMMAGILAAQPFRSELVGDAS CCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCCHH LMKRPMKRVADPLRMMGADISLSDAGTAPVVINGTKDLKTIEYLLPVPSAQVKSLVALAA HHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHH LHADGQSKIIEPIRSRDHTELMLGLETIDRPDGVREIIIDGRKPIAAKPFKVPADPSAAC HHCCCHHHHHHHHHCCCCHHEEEEHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHH FMIALGLLGERSEIVLRDVCLNPTRVAYIDVLQEAGAGLGIENVRSEGGEPVGDIVVRSC HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHH SSLAPLRISDHAVVAGVIDELPMLAVLSAFATGEFELHNATELRTKESDRIEAVVSNLER CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHHHHHHHHHHH LGFACEQYPDGFVVKGRPTVNREEAVIECFDDHRIAMSFAIAAEAAGASLRLSDREVAGV HCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEECCCCCCCC SFPNFFALIESLKQ CCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA