| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is csmA [H]
Identifier: 193211945
GI number: 193211945
Start: 289342
End: 289581
Strand: Direct
Name: csmA [H]
Synonym: Cpar_0271
Alternate gene names: 193211945
Gene position: 289342-289581 (Clockwise)
Preceding gene: 193211944
Following gene: 193211946
Centisome position: 12.64
GC content: 51.67
Gene sequence:
>240_bases ATGAGTGGAGGAGGCGTCTTTACTGACATCTTAGCCGCCGCAGGCCGCATTTTCGAAGTTATGGTCGAGGGTCACTGGGA GACCGTCGGCATGCTTTTTGATTCTCTGGGCAAAGGCACCATGAGGATCAACCGCAATGCCTATGGTTCCATGGGTGGTG GTAGCCTTCGTGGTTCTTCACCTGAGGTTTCCGGCTATGCTGTTCCGACCAAAGAAGTTGAATCGAAGTTTGCCAAATAA
Upstream 100 bases:
>100_bases TCTTTTAATTTGTGTTTTTTCGTTTATTCGCTTATTTTTGTCTTAAGTCTCATTTTTGAATGTTGTTTTTTCTGTCAATT AAATTCCAAAAGGAGGAGTT
Downstream 100 bases:
>100_bases GCAAACCGTTCAGCAAGATTCTAAAAGCAGTGACAGGTTTTGCACCGTCACTGCTTTTTTAGTTTTATGCCGTTCCCGCA TCGATTGCCTGCCTTTTGCC
Product: bacteriochlorophyll C binding protein
Products: NA
Alternate protein names: BChl c-binding; Chlorosome protein A [H]
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK
Sequences:
>Translated_79_residues MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK >Mature_78_residues SGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK
Specific function: Component of the photosynthetic apparatus. The light harvesting B740 complex binds bacteriochlorophyll c [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Chlorosome, chlorosome envelope [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BChl C/E-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001470 [H]
Pfam domain/function: PF02043 Bac_chlorC [H]
EC number: NA
Molecular weight: Translated: 8290; Mature: 8158
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSS CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC PEVSGYAVPTKEVESKFAK CCCCCEECCHHHHHHHCCC >Mature Secondary Structure SGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSS CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC PEVSGYAVPTKEVESKFAK CCCCCEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA