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The map label for this gene is (hspc4-1 [H]

Identifier: 193211929

GI number: 193211929

Start: 265082

End: 265510

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Cpar_0255

Alternate gene names: 193211929

Gene position: 265082-265510 (Clockwise)

Preceding gene: 193211928

Following gene: 193211939

Centisome position: 11.58

GC content: 48.95

Gene sequence:

>429_bases
ATGACACTCAAACTTTATGGCAAAGACCCCCTGAAGATGTTCGAAGATGTGTTCAACGAAAGGTTGACACCGTTCATCAG
CTCAATGGGATCGATGATGGCTCCGACCTTCAAGGTGGATATCAGTGAAGATGAGAAGGCTATCTATCTCTCAGCCGACA
TTCCCGGTGTAAAGAAAGAGGATGTAAGGGTAAGCATTGAGGACGATGTCATCAGCATCAGTGCGGAGCGCACTCAGGAA
GAGGAGGAGAAAAAGAAAAACTACCACCGTGTCGAACGCTCGTGGGGTAGCCTCTCAAGAAGCTTCACCATTGGTGACAA
CGTGGATAGTGACAACATCACCGCTAACTACGACAACGGTGTGTTAAAGGTCGTTGTTCCGAAAAAGGAGCCGGAAGCGA
AAAAGAGCAAGGCGGTTCCCGTCAGCTGA

Upstream 100 bases:

>100_bases
TCAACCGTTCAAATGGAATTTTAACGGTCTGAAAAGTGTTCTTATAGTTCGATGTAATTTGTATCTGATAGTTGTATGAA
TTGATAAAAGGAGCAGAACT

Downstream 100 bases:

>100_bases
TTCTTCTTCAGAAAACAGAACTTTCCCAGCCTCATGTTTCTAGACATGGGGCTTTTTTTATGGTCTCGTGGCGCGGGGGA
GGCTGATTGTGTCCGTCAGT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTLKLYGKDPLKMFEDVFNERLTPFISSMGSMMAPTFKVDISEDEKAIYLSADIPGVKKEDVRVSIEDDVISISAERTQE
EEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVVPKKEPEAKKSKAVPVS

Sequences:

>Translated_142_residues
MTLKLYGKDPLKMFEDVFNERLTPFISSMGSMMAPTFKVDISEDEKAIYLSADIPGVKKEDVRVSIEDDVISISAERTQE
EEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVVPKKEPEAKKSKAVPVS
>Mature_141_residues
TLKLYGKDPLKMFEDVFNERLTPFISSMGSMMAPTFKVDISEDEKAIYLSADIPGVKKEDVRVSIEDDVISISAERTQEE
EEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVVPKKEPEAKKSKAVPVS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16006; Mature: 15875

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKLYGKDPLKMFEDVFNERLTPFISSMGSMMAPTFKVDISEDEKAIYLSADIPGVKKE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCC
DVRVSIEDDVISISAERTQEEEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNG
CEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VLKVVVPKKEPEAKKSKAVPVS
EEEEEECCCCCCCHHCCCCCCC
>Mature Secondary Structure 
TLKLYGKDPLKMFEDVFNERLTPFISSMGSMMAPTFKVDISEDEKAIYLSADIPGVKKE
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCC
DVRVSIEDDVISISAERTQEEEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNG
CEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VLKVVVPKKEPEAKKSKAVPVS
EEEEEECCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA