| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211927
Identifier: 193211927
GI number: 193211927
Start: 263600
End: 264484
Strand: Direct
Name: 193211927
Synonym: Cpar_0253
Alternate gene names: NA
Gene position: 263600-264484 (Clockwise)
Preceding gene: 193211925
Following gene: 193211928
Centisome position: 11.51
GC content: 59.66
Gene sequence:
>885_bases ATGCTTGCAACCAACGAAAGCCGTCTTGTCGAAATTCTGCTCCAGTGCCAGCCCGGTCAGCCCCGCACTCGTGGCACCTG GGAGGTCGATCACCAGGGCACGCCCTTTATTCTTCCTTCCATCGGCGGTATCACCCTCAACCTTCAGGTCGGCGACCCGG CGTTCGGCTGGGAGGGCGACCACATCGAGCCGGGCGTGAGCTGCACCGCCGACACCCACAAACCCTACGAACACCCGAAT GTTACCGTGCAGATGCTGAGCTGCGTGGGCAACACGGCCACGATCGTCTCCGGCGAAGCCAAAGGCGAGACTGGTGTGGT GCTTGGCCATCACGGCGGCTCGGAGCACATCATCGTTGATTTTCCGCGTGAAGTGAAGGAAAAGATGGCCTACGGCGATA CCATTATGGTGAAATCGCGTGGTCAGGGACTCAAGCTGAGTGATTTCCCGCAGATTTCGCTCTTTAATCTCGATCCGTCG CTGCTGGCGAAAATGAAGATCACCGTCGCCGATGACGGTGTGCTCGAAGTGCCGGTGACGACGCTCGTTCCGGCCTACTG CATGGGTTCCGGCATCGGCTCGGCGCACGTCGCGAAAGGCGACTACGATATCGTGACCAGCGACCCTGAAGCCGTGCGTG AGTTCGGTATTGACCGCATCCGCTTCGGTGATTTCGTTGCGCTGCTTGACCAGGACAATCGTTACGGTCGGGCTTACCGC AAAGGTGCCGTCACCATCGGTGTCGTGGTGCACAGCGACTGCCGAGAAGCGGGGCATGGCCCCGGTGTTACCACCATCAT GACTTGCGCCACCGCCGGTATCAGACCGGTCATCGACTCCAAAGCCAATATCGCCGATCTGCTCGGAATAGGCACTCGGT TGTAA
Upstream 100 bases:
>100_bases TGCCGACGTCACCAAGGTTCAGCTAAATTTATTATGAGCTATGAACGGAAAGTACTTTTCCGACGCACCTCTTTTTCAAC TTTTTTCGTAATAGCTTCTT
Downstream 100 bases:
>100_bases GGAGCGTCGAGCCGAAACGTATCGTAAGGGCAGACCCGAACTGTCGGGTCTGCCTTTTTTCCCCGTGAACACCGCGAAAT GTAGAGTGTCTCATGAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLATNESRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCTADTHKPYEHPN VTVQMLSCVGNTATIVSGEAKGETGVVLGHHGGSEHIIVDFPREVKEKMAYGDTIMVKSRGQGLKLSDFPQISLFNLDPS LLAKMKITVADDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPEAVREFGIDRIRFGDFVALLDQDNRYGRAYR KGAVTIGVVVHSDCREAGHGPGVTTIMTCATAGIRPVIDSKANIADLLGIGTRL
Sequences:
>Translated_294_residues MLATNESRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCTADTHKPYEHPN VTVQMLSCVGNTATIVSGEAKGETGVVLGHHGGSEHIIVDFPREVKEKMAYGDTIMVKSRGQGLKLSDFPQISLFNLDPS LLAKMKITVADDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPEAVREFGIDRIRFGDFVALLDQDNRYGRAYR KGAVTIGVVVHSDCREAGHGPGVTTIMTCATAGIRPVIDSKANIADLLGIGTRL >Mature_294_residues MLATNESRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCTADTHKPYEHPN VTVQMLSCVGNTATIVSGEAKGETGVVLGHHGGSEHIIVDFPREVKEKMAYGDTIMVKSRGQGLKLSDFPQISLFNLDPS LLAKMKITVADDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPEAVREFGIDRIRFGDFVALLDQDNRYGRAYR KGAVTIGVVVHSDCREAGHGPGVTTIMTCATAGIRPVIDSKANIADLLGIGTRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31387; Mature: 31387
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATNESRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGD CCCCCHHHHEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCC HIEPGVSCTADTHKPYEHPNVTVQMLSCVGNTATIVSGEAKGETGVVLGHHGGSEHIIVD CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE FPREVKEKMAYGDTIMVKSRGQGLKLSDFPQISLFNLDPSLLAKMKITVADDGVLEVPVT CCHHHHHHHHCCCEEEEECCCCCCEECCCCCEEEEECCHHHEEEEEEEEECCCEEECCHH TLVPAYCMGSGIGSAHVAKGDYDIVTSDPEAVREFGIDRIRFGDFVALLDQDNRYGRAYR HHHHHHHHCCCCCCCEEECCCCEEEECCHHHHHHCCCCEEECCCEEEEEECCCCCCHHHH KGAVTIGVVVHSDCREAGHGPGVTTIMTCATAGIRPVIDSKANIADLLGIGTRL CCCEEEEEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLATNESRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGD CCCCCHHHHEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCC HIEPGVSCTADTHKPYEHPNVTVQMLSCVGNTATIVSGEAKGETGVVLGHHGGSEHIIVD CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE FPREVKEKMAYGDTIMVKSRGQGLKLSDFPQISLFNLDPSLLAKMKITVADDGVLEVPVT CCHHHHHHHHCCCEEEEECCCCCCEECCCCCEEEEECCHHHEEEEEEEEECCCEEECCHH TLVPAYCMGSGIGSAHVAKGDYDIVTSDPEAVREFGIDRIRFGDFVALLDQDNRYGRAYR HHHHHHHHCCCCCCCEEECCCCEEEECCHHHHHHCCCCEEECCCEEEEEECCCCCCHHHH KGAVTIGVVVHSDCREAGHGPGVTTIMTCATAGIRPVIDSKANIADLLGIGTRL CCCEEEEEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA